RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 WNT10BO00744 389 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 PDE8AO60658 829 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 FKTNO75072 461 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 ATP2B4P23634 1241 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
TSC2-223ENST00000568566 NEXNQ0ZGT2 675 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 DACT2Q5SW24 774 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 PODNQ7Z5L7 613 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
TSC2-223ENST00000568566 API5Q9BZZ5 524 aaKnown RBP10.55□□□□□ -0.72
TSC2-223ENST00000568566 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.55□□□□□ -0.72
TSC2-223ENST00000568566 GRM8O00222 908 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
TSC2-223ENST00000568566 INTS3Q68E01 1043 aaKnown RBP10.54□□□□□ -0.72
TSC2-223ENST00000568566 ARMC9Q7Z3E5 817 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 TTLL11Q8NHH1 800 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 ARHGAP45Q92619 1136 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 BRCA2P51587 3418 aa10.54□□□□□ -0.72
TSC2-223ENST00000568566 MYH3P11055 1940 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 CTSWP56202 376 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 SPRYD7Q5W111 196 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 GCC1Q96CN9 775 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
TSC2-223ENST00000568566 CDC5LQ99459 802 aaKnown RBP10.53□□□□□ -0.72
TSC2-223ENST00000568566 GREM2Q9H772 168 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 ANGEL1Q9UNK9 670 aaKnown RBP10.53□□□□□ -0.72
TSC2-223ENST00000568566 COG6Q9Y2V7 657 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 TRIM17Q9Y577 477 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 MYO3BQ8WXR4 1341 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 KIF16BQ96L93 1317 aa10.53□□□□□ -0.72
TSC2-223ENST00000568566 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 KLRK1P26718 216 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 HABP4Q5JVS0 413 aaKnown RBP10.52□□□□□ -0.73
TSC2-223ENST00000568566 STRIP1Q5VSL9 837 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 LMBR1LQ6UX01 489 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 TXNRD3Q86VQ6 643 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 APOBEC3FQ8IUX4 373 aaKnown RBP10.52□□□□□ -0.73
TSC2-223ENST00000568566 KIAA0825Q8IV33 1275 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 DZIP1LQ8IYY4 767 aaKnown RBP10.52□□□□□ -0.73
TSC2-223ENST00000568566 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 BICC1Q9H694 974 aaKnown RBP10.52□□□□□ -0.73
TSC2-223ENST00000568566 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.73
TSC2-223ENST00000568566 MINPP1Q9UNW1 487 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 LRRFIP2Q9Y608 721 aaKnown RBP10.52□□□□□ -0.73
TSC2-223ENST00000568566 UTYO14607 1347 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 SSC5DA1L4H1 1573 aa10.52□□□□□ -0.73
TSC2-223ENST00000568566 IPO8O15397 1037 aaKnown RBP10.51□□□□□ -0.73
TSC2-223ENST00000568566 CSF1RP07333 972 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
TSC2-223ENST00000568566 IRX6P78412 446 aaPredicted RBP10.51□□□□□ -0.73
TSC2-223ENST00000568566 LDLRAD1Q5T700 205 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 OTOP1Q7RTM1 612 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 KLHDC4Q8TBB5 520 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 CLMNQ96JQ2 1002 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 COA1Q9GZY4 146 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 BSDC1Q9NW68 430 aaPredicted RBP10.51□□□□□ -0.73
TSC2-223ENST00000568566 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
TSC2-223ENST00000568566 TRIOBPQ9H2D6 2365 aa10.51□□□□□ -0.73
TSC2-223ENST00000568566 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
TSC2-223ENST00000568566 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
TSC2-223ENST00000568566 SNAP23O00161 211 aa10.5□□□□□ -0.73
TSC2-223ENST00000568566 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
TSC2-223ENST00000568566 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
TSC2-223ENST00000568566 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
TSC2-223ENST00000568566 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
TSC2-223ENST00000568566 PLA2G12BQ9BX93 195 aa10.5□□□□□ -0.73
TSC2-223ENST00000568566 PUS3Q9BZE2 481 aaKnown RBP10.5□□□□□ -0.73
TSC2-223ENST00000568566 COL1A1P02452 1464 aaPredicted RBP10.49□□□□□ -0.73
TSC2-223ENST00000568566 MANSC4A6NHS7 340 aaPredicted RBP10.49□□□□□ -0.73
TSC2-223ENST00000568566 RFX5P48382 616 aaPredicted RBP10.49□□□□□ -0.73
TSC2-223ENST00000568566 RRP1P56182 461 aaKnown RBP10.49□□□□□ -0.73
TSC2-223ENST00000568566 GTF2IP78347 998 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 TTLL5Q6EMB2 1281 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 ITPRIPQ8IWB1 547 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 SLC10A4Q96EP9 437 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 ZBED3Q96IU2 234 aaPredicted RBP10.49□□□□□ -0.73
TSC2-223ENST00000568566 WNK4Q96J92 1243 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 DEFB129Q9H1M3 183 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 ZNF804BA4D1E1 1349 aa10.49□□□□□ -0.73
TSC2-223ENST00000568566 LAMB1P07942 1786 aa10.48□□□□□ -0.73
TSC2-223ENST00000568566 ZBTB48P10074 688 aaPredicted RBP10.48□□□□□ -0.73
TSC2-223ENST00000568566 IGHMBP2P38935 993 aaKnown RBP10.48□□□□□ -0.73
TSC2-223ENST00000568566 CRHR2Q13324 411 aa10.48□□□□□ -0.73
TSC2-223ENST00000568566 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
TSC2-223ENST00000568566 CRBNQ96SW2 442 aa10.48□□□□□ -0.73
TSC2-223ENST00000568566 PA2G4Q9UQ80 394 aaKnown RBP10.48□□□□□ -0.73
TSC2-223ENST00000568566 LEMD3Q9Y2U8 911 aa10.48□□□□□ -0.73
TSC2-223ENST00000568566 PCDHAC2Q9Y5I4 1007 aa10.48□□□□□ -0.73
TSC2-223ENST00000568566 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
TSC2-223ENST00000568566 ECM29Q5VYK3 1845 aa10.47□□□□□ -0.73
TSC2-223ENST00000568566 OTOFQ9HC10 1997 aa10.47□□□□□ -0.73
TSC2-223ENST00000568566 PNMA6EA0A0J9YXQ4 647 aa10.47□□□□□ -0.73
TSC2-223ENST00000568566 CLRN2A0PK11 232 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms