RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 MAP1SQ66K74 1059 aaPredicted RBP16.12■□□□□ 0.17
CNOT1-213ENST00000568158 VPS37DQ86XT2 251 aa16.12■□□□□ 0.17
CNOT1-213ENST00000568158 SIRT2Q8IXJ6 389 aa16.12■□□□□ 0.17
CNOT1-213ENST00000568158 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
CNOT1-213ENST00000568158 PSME4Q14997 1843 aa16.12■□□□□ 0.17
CNOT1-213ENST00000568158 ADORA1P30542 326 aa16.11■□□□□ 0.17
CNOT1-213ENST00000568158 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
CNOT1-213ENST00000568158 CERS5Q8N5B7 392 aa16.11■□□□□ 0.17
CNOT1-213ENST00000568158 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
CNOT1-213ENST00000568158 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
CNOT1-213ENST00000568158 USP17L8P0C7I0 530 aa16.1■□□□□ 0.17
CNOT1-213ENST00000568158 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
CNOT1-213ENST00000568158 KIAA0825Q8IV33 1275 aa16.1■□□□□ 0.17
CNOT1-213ENST00000568158 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
CNOT1-213ENST00000568158 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
CNOT1-213ENST00000568158 A0A1B0GUL7 405 aa16.09■□□□□ 0.17
CNOT1-213ENST00000568158 ITGBL1O95965 494 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-213ENST00000568158 ZNF280AP59817 542 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-213ENST00000568158 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-213ENST00000568158 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
CNOT1-213ENST00000568158 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
CNOT1-213ENST00000568158 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
CNOT1-213ENST00000568158 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
CNOT1-213ENST00000568158 FAM205AQ6ZU69 1335 aa16.09■□□□□ 0.17
CNOT1-213ENST00000568158 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.17
CNOT1-213ENST00000568158 POLR2AP24928 1970 aaKnown RBP16.08■□□□□ 0.16
CNOT1-213ENST00000568158 F8W031 263 aaPredicted RBP16.08■□□□□ 0.16
CNOT1-213ENST00000568158 HSPA6P17066 643 aa16.08■□□□□ 0.16
CNOT1-213ENST00000568158 PHKA1P46020 1223 aa16.08■□□□□ 0.16
CNOT1-213ENST00000568158 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.161e-9■□□□□ 9.1
CNOT1-213ENST00000568158 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.16
CNOT1-213ENST00000568158 XAGE2Q96GT9 111 aa16.08■□□□□ 0.16
CNOT1-213ENST00000568158 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.16
CNOT1-213ENST00000568158 PGAP2Q9UHJ9 254 aa16.08■□□□□ 0.16
CNOT1-213ENST00000568158 FKBP1AP62942 108 aaKnown RBP16.07■□□□□ 0.16
CNOT1-213ENST00000568158 SCARF1Q14162 830 aa16.07■□□□□ 0.16
CNOT1-213ENST00000568158 GRIK5Q16478 980 aa16.07■□□□□ 0.16
CNOT1-213ENST00000568158 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-213ENST00000568158 MYO3BQ8WXR4 1341 aa16.07■□□□□ 0.16
CNOT1-213ENST00000568158 ADAMTSL1Q8N6G6 1762 aa16.07■□□□□ 0.16
CNOT1-213ENST00000568158 HTRA3P83110 453 aa16.06■□□□□ 0.16
CNOT1-213ENST00000568158 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
CNOT1-213ENST00000568158 CCDC102BQ68D86 513 aa16.06■□□□□ 0.16
CNOT1-213ENST00000568158 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
CNOT1-213ENST00000568158 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
CNOT1-213ENST00000568158 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
CNOT1-213ENST00000568158 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
CNOT1-213ENST00000568158 ZNF609O15014 1411 aa16.05■□□□□ 0.16
CNOT1-213ENST00000568158 APBB1O00213 710 aa16.05■□□□□ 0.16
CNOT1-213ENST00000568158 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
CNOT1-213ENST00000568158 TNNI3KQ59H18 835 aa16.05■□□□□ 0.16
CNOT1-213ENST00000568158 GLIS2Q9BZE0 524 aaPredicted RBP16.05■□□□□ 0.16
CNOT1-213ENST00000568158 GNL3LQ9NVN8 582 aaKnown RBP16.05■□□□□ 0.16
CNOT1-213ENST00000568158 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
CNOT1-213ENST00000568158 FPGT-TNNI3KV9GXZ4 949 aa16.05■□□□□ 0.16
CNOT1-213ENST00000568158 PASKQ96RG2 1323 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 TRAF5O00463 557 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 HMMRO75330 724 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 GORABQ5T7V8 394 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
CNOT1-213ENST00000568158 GPR108Q9NPR9 543 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 PCDHB15Q9Y5E8 787 aa16.04■□□□□ 0.16
CNOT1-213ENST00000568158 WNT10BO00744 389 aa16.03■□□□□ 0.16
CNOT1-213ENST00000568158 APLP1P51693 650 aa16.03■□□□□ 0.16
CNOT1-213ENST00000568158 EAF2Q96CJ1 260 aaPredicted RBP16.03■□□□□ 0.16
CNOT1-213ENST00000568158 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
CNOT1-213ENST00000568158 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
CNOT1-213ENST00000568158 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
CNOT1-213ENST00000568158 TTF2Q9UNY4 1162 aaKnown RBP16.03■□□□□ 0.16
CNOT1-213ENST00000568158 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
CNOT1-213ENST00000568158 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
CNOT1-213ENST00000568158 DLGAP5Q15398 846 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 CFAP100Q494V2 611 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 ANGEL2Q5VTE6 544 aaKnown RBP16.02■□□□□ 0.16
CNOT1-213ENST00000568158 CDC37L1Q7L3B6 337 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 TBC1D22AQ8WUA7 517 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 DCPSQ96C86 337 aaKnown RBP16.02■□□□□ 0.16
CNOT1-213ENST00000568158 ZBED3Q96IU2 234 aaPredicted RBP16.02■□□□□ 0.16
CNOT1-213ENST00000568158 DENND2AQ9ULE3 1009 aa16.02■□□□□ 0.16
CNOT1-213ENST00000568158 MMP14P50281 582 aa16.01■□□□□ 0.15
CNOT1-213ENST00000568158 RBM5P52756 815 aaKnown RBP eCLIP16.01■□□□□ 0.15
CNOT1-213ENST00000568158 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
CNOT1-213ENST00000568158 PRMT6Q96LA8 375 aaPredicted RBP16.01■□□□□ 0.15
CNOT1-213ENST00000568158 GGA3Q9NZ52 723 aa16.01■□□□□ 0.15
CNOT1-213ENST00000568158 ADM5C9JUS6 153 aa16■□□□□ 0.15
CNOT1-213ENST00000568158 SEMA3EO15041 775 aa16■□□□□ 0.15
CNOT1-213ENST00000568158 RASGRF1Q13972 1273 aa16■□□□□ 0.15
CNOT1-213ENST00000568158 KRT26Q7Z3Y9 468 aa16■□□□□ 0.15
CNOT1-213ENST00000568158 TLR7Q9NYK1 1049 aaKnown RBP16■□□□□ 0.15
CNOT1-213ENST00000568158 AOX1Q06278 1338 aa15.99■□□□□ 0.15
CNOT1-213ENST00000568158 COL1A1P02452 1464 aaPredicted RBP15.99■□□□□ 0.15
CNOT1-213ENST00000568158 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
CNOT1-213ENST00000568158 CRKP46108 304 aa15.99■□□□□ 0.15
CNOT1-213ENST00000568158 CST9Q5W186 159 aa15.99■□□□□ 0.15
CNOT1-213ENST00000568158 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
CNOT1-213ENST00000568158 AACSQ86V21 672 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms