RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-208ENST00000567843 RIPOR2Q9Y4F9 1068 aa15.38■□□□□ 0.05
GTF3C1-208ENST00000567843 PITPNM2Q9BZ72 1349 aa15.38■□□□□ 0.05
GTF3C1-208ENST00000567843 BRPF1P55201 1214 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-208ENST00000567843 DLGAP5Q15398 846 aa15.37■□□□□ 0.05
GTF3C1-208ENST00000567843 ALDH1L2Q3SY69 923 aa15.37■□□□□ 0.05
GTF3C1-208ENST00000567843 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-208ENST00000567843 FZD1Q9UP38 647 aa15.37■□□□□ 0.05
GTF3C1-208ENST00000567843 AOX1Q06278 1338 aa15.37■□□□□ 0.05
GTF3C1-208ENST00000567843 THSD7BQ9C0I4 1608 aa15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 CLRN2A0PK11 232 aa15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 RBM5P52756 815 aaKnown RBP eCLIP15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 UBE4AQ14139 1066 aa15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 CFAP100Q494V2 611 aa15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-208ENST00000567843 SLC10A3P09131 477 aa15.35■□□□□ 0.05
GTF3C1-208ENST00000567843 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
GTF3C1-208ENST00000567843 CHAF1AQ13111 956 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-208ENST00000567843 RASAL3Q86YV0 1011 aa15.35■□□□□ 0.05
GTF3C1-208ENST00000567843 ZNF646O15015 1829 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-208ENST00000567843 TRPA1O75762 1119 aa15.34■□□□□ 0.05
GTF3C1-208ENST00000567843 TDRD7Q8NHU6 1098 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-208ENST00000567843 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
GTF3C1-208ENST00000567843 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
GTF3C1-208ENST00000567843 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
GTF3C1-208ENST00000567843 MROH5Q6ZUA9 1318 aa15.34■□□□□ 0.05
GTF3C1-208ENST00000567843 FKBP1BP68106 108 aa15.33■□□□□ 0.04
GTF3C1-208ENST00000567843 GRIK5Q16478 980 aa15.33■□□□□ 0.04
GTF3C1-208ENST00000567843 MFSD14BQ5SR56 506 aa15.33■□□□□ 0.04
GTF3C1-208ENST00000567843 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
GTF3C1-208ENST00000567843 APOBEC3FQ8IUX4 373 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-208ENST00000567843 TTF2Q9UNY4 1162 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-208ENST00000567843 A0A1B0GUL6 1792 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 CA12O43570 354 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 NF2P35240 595 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 BCAMP50895 628 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 RARSP54136 660 aaKnown RBP15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 ABHD8Q96I13 439 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 SIL1Q9H173 461 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 RNF186Q9NXI6 227 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 FAM205AQ6ZU69 1335 aa15.32■□□□□ 0.04
GTF3C1-208ENST00000567843 PDE8BO95263 885 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 UBTFL1P0CB47 393 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 MMP14P50281 582 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 PTPN12Q05209 780 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 FBXO33Q7Z6M2 555 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 MIER1Q8N108 512 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 TNNQ9UQP3 1299 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 CASP8AP2Q9UKL3 1982 aa15.31■□□□□ 0.04
GTF3C1-208ENST00000567843 EYA2O00167 538 aa15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 MYO1BO43795 1136 aa15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 FKBP1AP62942 108 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 CAVIN4Q5BKX8 364 aa15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 TDRD3Q9H7E2 651 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 LRRFIP2Q9Y608 721 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-208ENST00000567843 PAPPA2Q9BXP8 1791 aa15.29■□□□□ 0.04
GTF3C1-208ENST00000567843 CT47B1P0C2W7 299 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-208ENST00000567843 NBPF12Q5TAG4 269 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-208ENST00000567843 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
GTF3C1-208ENST00000567843 MEIS3Q99687 375 aa15.29■□□□□ 0.04
GTF3C1-208ENST00000567843 PA2G4Q9UQ80 394 aaKnown RBP15.29■□□□□ 0.04
GTF3C1-208ENST00000567843 CCDC85CA6NKD9 419 aa15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 DGKZQ13574 1117 aa15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 RASA3Q14644 834 aa15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 PUM3Q15397 648 aaKnown RBP15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 ATG9AQ7Z3C6 839 aa15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 MCOLN1Q9GZU1 580 aa15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 ZNF70Q9UC06 446 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-208ENST00000567843 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 BCAR3O75815 825 aa15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 IFIT1P09914 478 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 FGFR2P21802 821 aa15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 CRKP46108 304 aa15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 CDAN1Q8IWY9 1227 aa15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 DZIP1LQ8IYY4 767 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 CLMNQ96JQ2 1002 aa15.27■□□□□ 0.04
GTF3C1-208ENST00000567843 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 SLC5A1P13866 664 aa15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 CACNB3P54284 484 aa15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 CLUAP1Q96AJ1 413 aa15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 SERPINA10Q9UK55 444 aa15.26■□□□□ 0.03
GTF3C1-208ENST00000567843 SSC5DA1L4H1 1573 aa15.25■□□□□ 0.03
GTF3C1-208ENST00000567843 SUPT20HL1Q3ZLR7 823 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms