RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 TTLL5Q6EMB2 1281 aa17.96■□□□□ 0.47
SMG1-213ENST00000567737 LRCH3Q96II8 777 aa17.96■□□□□ 0.47
SMG1-213ENST00000567737 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
SMG1-213ENST00000567737 CUL9Q8IWT3 2517 aa17.95■□□□□ 0.46
SMG1-213ENST00000567737 SOX1O00570 391 aaPredicted RBP17.95■□□□□ 0.46
SMG1-213ENST00000567737 DLGAP5Q15398 846 aa17.95■□□□□ 0.46
SMG1-213ENST00000567737 PDE8AO60658 829 aa17.94■□□□□ 0.46
SMG1-213ENST00000567737 WDHD1O75717 1129 aaPredicted RBP17.94■□□□□ 0.46
SMG1-213ENST00000567737 PRMT2P55345 433 aa17.94■□□□□ 0.46
SMG1-213ENST00000567737 OPTNQ96CV9 577 aa17.94■□□□□ 0.46
SMG1-213ENST00000567737 PNNQ9H307 717 aaKnown RBP17.94■□□□□ 0.46
SMG1-213ENST00000567737 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
SMG1-213ENST00000567737 MYO1BO43795 1136 aa17.93■□□□□ 0.46
SMG1-213ENST00000567737 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
SMG1-213ENST00000567737 GNRH1P01148 92 aa17.93■□□□□ 0.46
SMG1-213ENST00000567737 HDGFL1Q5TGJ6 251 aa17.93■□□□□ 0.46
SMG1-213ENST00000567737 MS4A4AQ96JQ5 239 aa17.93■□□□□ 0.46
SMG1-213ENST00000567737 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
SMG1-213ENST00000567737 ELP3Q9H9T3 547 aa17.93■□□□□ 0.46
SMG1-213ENST00000567737 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
SMG1-213ENST00000567737 ZNF804BA4D1E1 1349 aa17.93■□□□□ 0.46
SMG1-213ENST00000567737 CCL15-CCL14A0A0B4J2E2 113 aa17.92■□□□□ 0.46
SMG1-213ENST00000567737 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
SMG1-213ENST00000567737 MTFR1Q15390 333 aa17.92■□□□□ 0.46
SMG1-213ENST00000567737 CCL15Q16663 113 aa17.92■□□□□ 0.46
SMG1-213ENST00000567737 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
SMG1-213ENST00000567737 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
SMG1-213ENST00000567737 DBF4Q9UBU7 674 aaPredicted RBP17.92■□□□□ 0.46
SMG1-213ENST00000567737 ZNF646O15015 1829 aaPredicted RBP17.91■□□□□ 0.46
SMG1-213ENST00000567737 GJA8P48165 433 aa17.91■□□□□ 0.46
SMG1-213ENST00000567737 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
SMG1-213ENST00000567737 GTF2A2P52657 109 aa17.91■□□□□ 0.46
SMG1-213ENST00000567737 GTF2IP78347 998 aa17.91■□□□□ 0.46
SMG1-213ENST00000567737 LACTBP83111 547 aaPredicted RBP17.91■□□□□ 0.46
SMG1-213ENST00000567737 NBPF12Q5TAG4 269 aaPredicted RBP17.91■□□□□ 0.46
SMG1-213ENST00000567737 VEZTQ9HBM0 779 aa17.91■□□□□ 0.46
SMG1-213ENST00000567737 MINPP1Q9UNW1 487 aa17.91■□□□□ 0.46
SMG1-213ENST00000567737 CLRN2A0PK11 232 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
SMG1-213ENST00000567737 RIPK4P57078 832 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 RIC3Q7Z5B4 369 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 UBE2Q1Q7Z7E8 422 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 COL25A1Q9BXS0 654 aaPredicted RBP17.9■□□□□ 0.46
SMG1-213ENST00000567737 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 HYPKQ9NX55 129 aa17.9■□□□□ 0.46
SMG1-213ENST00000567737 TLR2O60603 784 aa17.89■□□□□ 0.45
SMG1-213ENST00000567737 GPR153Q6NV75 609 aa17.89■□□□□ 0.45
SMG1-213ENST00000567737 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
SMG1-213ENST00000567737 DEFB123Q8N688 67 aa17.89■□□□□ 0.45
SMG1-213ENST00000567737 MTMR14Q8NCE2 650 aa17.89■□□□□ 0.45
SMG1-213ENST00000567737 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
SMG1-213ENST00000567737 STXBP5LQ9Y2K9 1186 aa17.89■□□□□ 0.45
SMG1-213ENST00000567737 EVI5O60447 810 aa17.88■□□□□ 0.45
SMG1-213ENST00000567737 GJB1P08034 283 aa17.88■□□□□ 0.45
SMG1-213ENST00000567737 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
SMG1-213ENST00000567737 LMOD3Q0VAK6 560 aa17.88■□□□□ 0.45
SMG1-213ENST00000567737 TXNRD3Q86VQ6 643 aa17.88■□□□□ 0.45
SMG1-213ENST00000567737 LEMD3Q9Y2U8 911 aa17.88■□□□□ 0.45
SMG1-213ENST00000567737 FARP2O94887 1054 aaPredicted RBP17.87■□□□□ 0.45
SMG1-213ENST00000567737 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
SMG1-213ENST00000567737 MYD88Q99836 296 aa17.87■□□□□ 0.45
SMG1-213ENST00000567737 RNF208Q9H0X6 261 aa17.87■□□□□ 0.45
SMG1-213ENST00000567737 HOXB7P09629 217 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 CCL5P13501 91 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 HOXD10P28358 340 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 GRK4P32298 578 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 RASA3Q14644 834 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 RAET1EQ8TD07 263 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 JARID2Q92833 1246 aaPredicted RBP17.86■□□□□ 0.45
SMG1-213ENST00000567737 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 PCDHAC2Q9Y5I4 1007 aa17.86■□□□□ 0.45
SMG1-213ENST00000567737 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
SMG1-213ENST00000567737 CTSWP56202 376 aa17.85■□□□□ 0.45
SMG1-213ENST00000567737 UBXN2AP68543 259 aa17.85■□□□□ 0.45
SMG1-213ENST00000567737 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
SMG1-213ENST00000567737 ZCCHC17Q9NP64 241 aaKnown RBP17.85■□□□□ 0.45
SMG1-213ENST00000567737 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
SMG1-213ENST00000567737 BIN2Q9UBW5 565 aaPredicted RBP17.85■□□□□ 0.45
SMG1-213ENST00000567737 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
SMG1-213ENST00000567737 F8W031 263 aaPredicted RBP17.84■□□□□ 0.45
SMG1-213ENST00000567737 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
SMG1-213ENST00000567737 TNFAIP1Q13829 316 aa17.84■□□□□ 0.45
SMG1-213ENST00000567737 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
SMG1-213ENST00000567737 PRMT6Q96LA8 375 aaPredicted RBP17.84■□□□□ 0.45
SMG1-213ENST00000567737 SRRDQ9UH36 339 aa17.84■□□□□ 0.45
SMG1-213ENST00000567737 CSADQ9Y600 493 aa17.84■□□□□ 0.45
SMG1-213ENST00000567737 ZSWIM8A7E2V4 1837 aa17.84■□□□□ 0.45
SMG1-213ENST00000567737 ECM29Q5VYK3 1845 aa17.84■□□□□ 0.45
SMG1-213ENST00000567737 OTOFQ9HC10 1997 aa17.83■□□□□ 0.44
SMG1-213ENST00000567737 CHL1O00533 1208 aa17.83■□□□□ 0.44
SMG1-213ENST00000567737 CETPP11597 493 aa17.83■□□□□ 0.44
SMG1-213ENST00000567737 RBM5P52756 815 aaKnown RBP eCLIP17.83■□□□□ 0.44
SMG1-213ENST00000567737 VGLL4Q14135 290 aa17.83■□□□□ 0.44
SMG1-213ENST00000567737 Q7L0L9 218 aa17.83■□□□□ 0.44
SMG1-213ENST00000567737 CERS5Q8N5B7 392 aa17.83■□□□□ 0.44
SMG1-213ENST00000567737 HELBQ8NG08 1087 aaPredicted RBP17.83■□□□□ 0.44
SMG1-213ENST00000567737 U2AF1L4Q8WU68 220 aaKnown RBP17.83■□□□□ 0.44
SMG1-213ENST00000567737 CD209Q9NNX6 404 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms