RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 USP19O94966 1318 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 NR1I2O75469 434 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 MAP2K2P36507 400 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 ETF1P62495 437 aaKnown RBP14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 MTX1Q13505 466 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 WTAPQ15007 396 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 TMEM266Q2M3C6 531 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 GDAP1L1Q96MZ0 367 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 TRIM75PA6NK02 468 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 JAK2O60674 1132 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 RXRAP19793 462 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 HPDP32754 393 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 IGHMBP2P38935 993 aaKnown RBP14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 SPAG5Q96R06 1193 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 FOXO3O43524 673 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 TOM1L2Q6ZVM7 507 aa14.06□□□□□ -0.16
CSPG4P13-202ENST00000567704 PPARDQ03181 441 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 RTN1Q16799 776 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 ALDH1L1O75891 902 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 ZNF202O95125 648 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 ZNF76P36508 570 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 FAM227BQ96M60 508 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 ARHGEF12Q9NZN5 1544 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 ARID5AQ03989 594 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 TTC6Q86TZ1 520 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 MTMR6Q9Y217 621 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 TRAPPC8Q9Y2L5 1435 aa14.05□□□□□ -0.16
CSPG4P13-202ENST00000567704 SMIM23A6NLE4 172 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 BMP15O95972 392 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 LDHAL6AQ6ZMR3 332 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 TRMT2AQ8IZ69 625 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 VPS16Q9H269 839 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 NSFL1CQ9UNZ2 370 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 KIF4AO95239 1232 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 CLNS1AP54105 237 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 IFI16Q16666 785 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 ME3Q16798 604 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 MTHFSDQ2M296 383 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 SELENOOQ9BVL4 669 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 TTF2Q9UNY4 1162 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 NLRP12P59046 1061 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 CWF19L2Q2TBE0 894 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 PAIP2Q9BPZ3 127 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 TUBB2AQ13885 445 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 TUBB2BQ9BVA1 445 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 NFE2L3Q9Y4A8 694 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 PZPP20742 1482 aa14.04□□□□□ -0.16
CSPG4P13-202ENST00000567704 GOLGA6BA6NDN3 693 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 KSR2Q6VAB6 950 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 PAG1Q9NWQ8 432 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 NEO1Q92859 1461 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 ZFYP08048 801 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 BRD3Q15059 726 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 TMEM132AQ24JP5 1023 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 LMBR1LQ6UX01 489 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 CACTINQ8WUQ7 758 aaKnown RBP14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 ATP2B3Q16720 1220 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 MRFAP1L1Q96HT8 127 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 KCNH3Q9ULD8 1083 aa14.03□□□□□ -0.16
CSPG4P13-202ENST00000567704 EFCAB8A8MWE9 144 aa14.02□□□□□ -0.16
CSPG4P13-202ENST00000567704 THEMISQ8N1K5 641 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P13-202ENST00000567704 MYCBPQ99417 103 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P13-202ENST00000567704 ZCCHC11Q5TAX3 1644 aaKnown RBP14.02□□□□□ -0.16
CSPG4P13-202ENST00000567704 NBPF7P0C2Y1 421 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P13-202ENST00000567704 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.16
CSPG4P13-202ENST00000567704 ADKP55263 362 aaKnown RBP14.02□□□□□ -0.17
CSPG4P13-202ENST00000567704 ASIC1P78348 528 aa14.02□□□□□ -0.17
CSPG4P13-202ENST00000567704 SEC31AO94979 1220 aaKnown RBP14.02□□□□□ -0.17
CSPG4P13-202ENST00000567704 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.17
CSPG4P13-202ENST00000567704 A2MP01023 1474 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 A0A1W2PRG0 241 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 LIG3P49916 1009 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 XAGE3Q8WTP9 111 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 DESI2Q9BSY9 194 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 MRVI1Q9Y6F6 885 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 ANKRD18BA2A2Z9 1011 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 SND1Q7KZF4 910 aaKnown RBP eCLIP14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 HOOK3Q86VS8 718 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 SAMD15Q9P1V8 674 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 SLC5A1P13866 664 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 ACEP12821 1306 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 KIF5BP33176 963 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 LINS1Q8NG48 757 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 ZNF526Q8TF50 670 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms