RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 SFI1A8K8P3 1242 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 TMEM229AB2RXF0 380 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 TCERG1O14776 1098 aaKnown RBP7.36□□□□□ -1.23
SF3B3-210ENST00000567654 SPINT1O43278 529 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 LZTS3O60299 673 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-210ENST00000567654 VAMP4O75379 141 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 GDF10P55107 478 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 GNAI1P63096 354 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 LMOD3Q0VAK6 560 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 SKAP1Q86WV1 359 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-210ENST00000567654 FRAT1Q92837 279 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-210ENST00000567654 MIS18AQ9NYP9 233 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 PAPPAQ13219 1627 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 COL5A2P05997 1499 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-210ENST00000567654 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L21D6R901 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 ELL2O00472 640 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-210ENST00000567654 CHL1O00533 1208 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 GNRH1P01148 92 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 CT47B1P0C2W7 299 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-210ENST00000567654 SNRPBP14678 240 aaKnown RBP7.35□□□□□ -1.23
SF3B3-210ENST00000567654 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 FOXD4L5Q5VV16 416 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-210ENST00000567654 IL17REQ8NFR9 667 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 GAS2L2Q8NHY3 880 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 CNKSR1Q969H4 720 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 SMC4Q9NTJ3 1288 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 RGS12O14924 1447 aa7.35□□□□□ -1.23
SF3B3-210ENST00000567654 CEMIPQ8WUJ3 1361 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 KDM2BQ8NHM5 1336 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 GNAT3A8MTJ3 354 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 TRIM27P14373 513 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 CALD1Q05682 793 aaKnown RBP7.34□□□□□ -1.23
SF3B3-210ENST00000567654 PTK7Q13308 1070 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 PDE3AQ14432 1141 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 TWISTNBQ3B726 338 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-210ENST00000567654 CCDC102BQ68D86 513 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 TRIM50Q86XT4 487 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 ZNF358Q9NW07 568 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 NOB1Q9ULX3 412 aaKnown RBP7.34□□□□□ -1.23
SF3B3-210ENST00000567654 KDM6AO15550 1401 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-210ENST00000567654 KAT6BQ8WYB5 2073 aa7.34□□□□□ -1.23
SF3B3-210ENST00000567654 DKK1O94907 266 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 CANXP27824 592 aaKnown RBP7.33□□□□□ -1.24
SF3B3-210ENST00000567654 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 DPYDQ12882 1025 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 CLN3Q13286 438 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 ALDH1L2Q3SY69 923 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 ZKSCAN2Q63HK3 967 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 LARP1Q6PKG0 1096 aaKnown RBP7.33□□□□□ -1.24
SF3B3-210ENST00000567654 PBXIP1Q96AQ6 731 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 NLRP3Q96P20 1036 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 LGR6Q9HBX8 967 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 DNMT3LQ9UJW3 386 aa7.33□□□□□ -1.24
SF3B3-210ENST00000567654 AFDNP55196 1824 aaKnown RBP7.33□□□□□ -1.24
SF3B3-210ENST00000567654 NWD2Q9ULI1 1742 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 MRC1P22897 1456 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 CARNS1A5YM72 827 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 TTLL8A6PVC2 850 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 INHAP05111 366 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 CENPCQ03188 943 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 ZNF530Q6P9A1 599 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-210ENST00000567654 PRICKLE2Q7Z3G6 844 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 TMEM57Q8N5G2 664 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 RNF217Q8TC41 542 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 XAGE2Q96GT9 111 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 ESYT1Q9BSJ8 1104 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 ZMIZ1Q9ULJ6 1067 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 DOT1LQ8TEK3 1739 aa7.32□□□□□ -1.24
SF3B3-210ENST00000567654 ARFGEF2Q9Y6D5 1785 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 OVOS2A0A0G2JMS6 1433 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 FAM196BA6NMK8 535 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 KCNQ3O43525 872 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 HTATSF1O43719 755 aaKnown RBP7.31□□□□□ -1.24
SF3B3-210ENST00000567654 IGHDP01880 384 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 RHOQP17081 205 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
SF3B3-210ENST00000567654 TLR1Q15399 786 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 TBCELQ5QJ74 424 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 ATF7IPQ6VMQ6 1270 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 MPRIPQ6WCQ1 1025 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 ANKMY2Q8IV38 441 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 TNS4Q8IZW8 715 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 SIX5Q8N196 739 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 LARGE2Q8N3Y3 721 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 TSEN2Q8NCE0 465 aaKnown RBP7.31□□□□□ -1.24
SF3B3-210ENST00000567654 STK32AQ8WU08 396 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 RTF1Q92541 710 aaKnown RBP7.31□□□□□ -1.24
SF3B3-210ENST00000567654 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms