RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.52
CDH13-210ENST00000567445 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.52
CDH13-210ENST00000567445 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.52
CDH13-210ENST00000567445 XDHP47989 1333 aa11.77□□□□□ -0.53
CDH13-210ENST00000567445 SLC34A2O95436 690 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
CDH13-210ENST00000567445 KRT26Q7Z3Y9 468 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
CDH13-210ENST00000567445 NEURL1BA8MQ27 555 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 AOC2O75106 756 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 ATP2B4P23634 1241 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
CDH13-210ENST00000567445 G2E3Q7L622 706 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 DCPSQ96C86 337 aaKnown RBP11.76□□□□□ -0.53
CDH13-210ENST00000567445 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
CDH13-210ENST00000567445 MYH3P11055 1940 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 POLR2AP24928 1970 aaKnown RBP11.75□□□□□ -0.53
CDH13-210ENST00000567445 ZNF609O15014 1411 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 H7C1W4 665 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 UBE3BQ7Z3V4 1068 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 AGBL3Q8NEM8 1001 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDH13-210ENST00000567445 GREM2Q9H772 168 aa11.75□□□□□ -0.53
CDH13-210ENST00000567445 BSDC1Q9NW68 430 aaPredicted RBP11.75□□□□□ -0.53
CDH13-210ENST00000567445 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
CDH13-210ENST00000567445 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
CDH13-210ENST00000567445 HUNKP57058 714 aa11.74□□□□□ -0.53
CDH13-210ENST00000567445 FLIIQ13045 1269 aa11.74□□□□□ -0.53
CDH13-210ENST00000567445 GCKRQ14397 625 aa11.74□□□□□ -0.53
CDH13-210ENST00000567445 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
CDH13-210ENST00000567445 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
CDH13-210ENST00000567445 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
CDH13-210ENST00000567445 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
CDH13-210ENST00000567445 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
CDH13-210ENST00000567445 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 ANP32CO43423 234 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 CA12O43570 354 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 ZNF280AP59817 542 aaPredicted RBP11.73□□□□□ -0.53
CDH13-210ENST00000567445 NOGQ13253 232 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 WDR63Q8IWG1 891 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 SULF1Q8IWU6 871 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 GMLQ99445 158 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 GBA2Q9HCG7 927 aaPredicted RBP11.73□□□□□ -0.53
CDH13-210ENST00000567445 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 PSME4Q14997 1843 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
CDH13-210ENST00000567445 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
CDH13-210ENST00000567445 CCT4P50991 539 aaKnown RBP11.72□□□□□ -0.53
CDH13-210ENST00000567445 FOXK1P85037 733 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
CDH13-210ENST00000567445 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 DNAAF4Q8WXU2 420 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 PLA2G12BQ9BX93 195 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 MYH16Q9H6N6 1097 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
CDH13-210ENST00000567445 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
CDH13-210ENST00000567445 WTIPA6NIX2 430 aaPredicted RBP11.71□□□□□ -0.53
CDH13-210ENST00000567445 VAMP4O75379 141 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 CASP7P55210 303 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 SCARF1Q14162 830 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 RGMBQ6NW40 437 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 TSKSQ9UJT2 592 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
CDH13-210ENST00000567445 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
CDH13-210ENST00000567445 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.53
CDH13-210ENST00000567445 ITGA6P23229 1130 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
CDH13-210ENST00000567445 ABHD8Q96I13 439 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 MYOZ2Q9NPC6 264 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 FAM155AB1AL88 458 aaPredicted RBP11.7□□□□□ -0.54
CDH13-210ENST00000567445 CSF1RP07333 972 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 EXOSC9Q06265 439 aaKnown RBP11.7□□□□□ -0.54
CDH13-210ENST00000567445 DACT2Q5SW24 774 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 CDCA5Q96FF9 252 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 ZIC5Q96T25 663 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 MPHOSPH8Q99549 860 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
CDH13-210ENST00000567445 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
CDH13-210ENST00000567445 NUDT7P0C024 238 aa11.69□□□□□ -0.54
CDH13-210ENST00000567445 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
CDH13-210ENST00000567445 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
CDH13-210ENST00000567445 TXNRD3Q86VQ6 643 aa11.69□□□□□ -0.54
CDH13-210ENST00000567445 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
CDH13-210ENST00000567445 ZNF804BA4D1E1 1349 aa11.69□□□□□ -0.54
CDH13-210ENST00000567445 PITPNM2Q9BZ72 1349 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms