RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ERO1AQ96HE7 468 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 ZNF408Q9H9D4 720 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 LRP2BPQ9P2M1 347 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 PHRF1Q9P1Y6 1649 aaKnown RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 CPLX1O14810 134 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 FILIP1LQ4L180 1135 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 EAPPQ56P03 285 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC183Q5T5S1 534 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 C10orf67Q8IYJ2 551 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 LUC7LQ9NQ29 371 aaKnown RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 ERICH2A1L162 156 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 ZNF496Q96IT1 587 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 CD163L1Q9NR16 1453 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 ARHGAP23Q9P227 1491 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 GPR162Q16538 588 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 ALDH1L2Q3SY69 923 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC152Q4G0S7 254 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 TBC1D9BQ66K14 1250 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 CLASRPQ8N2M8 674 aaKnown RBP6.86□□□□□ -1.31
CNOT1-211ENST00000567188 ZNF396Q96N95 335 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-211ENST00000567188 ICE2Q659A1 982 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 DEFB132Q7Z7B7 95 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 RAB11FIP4Q86YS3 637 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 SPATA31A5Q5VU36 1347 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 SPATA31A7Q8IWB4 1347 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 ANKRD26Q9UPS8 1709 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 TUBB2AQ13885 445 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC150Q8NCX0 1101 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 FBXO41Q8TF61 875 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 TUBB2BQ9BVA1 445 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 OPA1O60313 960 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 NAP1L1P55209 391 aaKnown RBP6.86□□□□□ -1.31
CNOT1-211ENST00000567188 CDK12Q9NYV4 1490 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-211ENST00000567188 ZFYP08048 801 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-211ENST00000567188 RLBP1P12271 317 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 SLC5A1P13866 664 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 CEP135Q66GS9 1140 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 C2CD5Q86YS7 1000 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 CNBD1Q8NA66 436 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 PALLDQ8WX93 1383 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 LUC7L3O95232 432 aaKnown RBP6.86□□□□□ -1.31
CNOT1-211ENST00000567188 SYNE4Q8N205 404 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 NCAPGQ9BPX3 1015 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 VCXQ9H320 206 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 ERBB3P21860 1342 aa6.86□□□□□ -1.31
CNOT1-211ENST00000567188 LOC102724428A0A0B4J2F2 783 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SIK1P57059 783 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 IRX1P78414 480 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 HLFQ16534 295 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC40Q4G0X9 1142 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 LRSAM1Q6UWE0 723 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SUCLG2Q96I99 432 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 ARFGAP3Q9NP61 516 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SLC8A1P32418 973 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 RBM6P78332 1123 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CHD1LQ86WJ1 897 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 XRN1Q8IZH2 1706 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 ITGA6P23229 1130 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 USP5P45974 858 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CAVIN4Q5BKX8 364 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 DAAM2Q86T65 1068 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 DTNBP1Q96EV8 351 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 RMDN2Q96LZ7 410 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 ZMAT2Q96NC0 199 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CDCA7Q9BWT1 371 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 MEGF6O75095 1541 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 RTL1A6NKG5 1358 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CAPN2P17655 700 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 ARFGAP2Q8N6H7 521 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 TEX13AQ9BXU3 409 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SHPRHQ149N8 1683 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SPATA31A6Q5VVP1 1343 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 NSRP1Q9H0G5 558 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 LUC7L2Q9Y383 392 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CYP27B1O15528 508 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SFPQP23246 707 aaKnown RBP eCLIP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 KRT32Q14532 448 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 VEZTQ9HBM0 779 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SETD1AO15047 1707 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 ERVV-2B6SEH9 535 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 NAA25Q14CX7 972 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 SART3Q15020 963 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 MCTP2Q6DN12 878 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC121Q6ZUS5 278 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 GOLGA5Q8TBA6 731 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 GNL3LQ9NVN8 582 aaKnown RBP6.85□□□□□ -1.31
CNOT1-211ENST00000567188 USH1CQ9Y6N9 552 aa6.85□□□□□ -1.31
CNOT1-211ENST00000567188 KAT6BQ8WYB5 2073 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 VAMP4O75379 141 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 NEBLO76041 1014 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 ANAPC15P60006 121 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 ZSCAN31Q96LW9 406 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-211ENST00000567188 THRAP3Q9Y2W1 955 aaKnown RBP6.84□□□□□ -1.31
CNOT1-211ENST00000567188 KINO60870 393 aaKnown RBP6.84□□□□□ -1.31
CNOT1-211ENST00000567188 UFL1O94874 794 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 LMBR1LQ6UX01 489 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 KRBA2Q6ZNG9 492 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms