RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 KRT222Q8N1A0 295 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 PHACTR3Q96KR7 559 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 JAKMIP1Q96N16 626 aaKnown RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 RNF41Q9H4P4 317 aaPredicted RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 KAT14Q9H8E8 782 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 CACYBPQ9HB71 228 aaKnown RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 OVOS2A0A0G2JMS6 1433 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 OVOS2A0A0J9YW53 1432 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 OVOS2Q6IE36 1432 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 CCDC194A0A1B0GVG4 234 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 A0A1W2PRG0 241 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 ZNF213O14771 459 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 TBC1D32Q96NH3 1257 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 TCP11L1Q9NUJ3 509 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 CASTP20810 708 aaKnown RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 SATB1Q01826 763 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 USP37Q86T82 979 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 SMC1BQ8NDV3 1235 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 JDP2Q8WYK2 163 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 NACA2Q9H009 215 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 PDRG1Q9NUG6 133 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 MADDQ8WXG6 1647 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 MYH11P35749 1972 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 TUBB2AQ13885 445 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 CCDC183Q5T5S1 534 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 NBPF5PQ86XG9 351 aaPredicted RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 TUBB2BQ9BVA1 445 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 UPF3BQ9BZI7 483 aaKnown RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 IMPG2Q9BZV3 1241 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 SH2B1Q9NRF2 756 aaPredicted RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 ZKSCAN5Q9Y2L8 839 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 CEP83Q9Y592 693 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 TSPY2A6NKD2 308 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 PPP1R9BQ96SB3 815 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 NUP88Q99567 741 aaPredicted RBP7.09□□□□□ -1.27
CDH13-209ENST00000567109 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
CDH13-209ENST00000567109 USO1O60763 962 aaKnown RBP7.09□□□□□ -1.28
CDH13-209ENST00000567109 CUL4BQ13620 913 aa7.09□□□□□ -1.28
CDH13-209ENST00000567109 MYD88Q99836 296 aa7.09□□□□□ -1.28
CDH13-209ENST00000567109 RTCBQ9Y3I0 505 aaKnown RBP7.09□□□□□ -1.28
CDH13-209ENST00000567109 SH3BGRP55822 239 aaPredicted RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 TMCO3Q6UWJ1 677 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 ZGPATQ8N5A5 531 aaKnown RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 NYXQ9GZU5 481 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 BCAR3O75815 825 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 FBLN1P23142 703 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 GPTP24298 496 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 GABPAQ06546 454 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 SPECC1Q5M775 1068 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 UTP14CQ5TAP6 766 aaKnown RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 SSH1Q8WYL5 1049 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 PPRC1Q5VV67 1664 aaKnown RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 F8W031 263 aaPredicted RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 ANKRD13DQ6ZTN6 518 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 MROH1Q8NDA8 1641 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 FAM83GA6ND36 823 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 CCDC144CPQ8IYA2 1237 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 UBXN4Q92575 508 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 PARP3Q9Y6F1 533 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 CCDC172P0C7W6 258 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 PPP4R3BQ5MIZ7 849 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 CFAP58Q5T655 872 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 PICK1Q9NRD5 415 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 KIF5CO60282 957 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 EIF4A1P60842 406 aaKnown RBP7.08□□□□□ -1.28
CDH13-209ENST00000567109 CRB1P82279 1406 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 ZNF790Q6PG37 636 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 DDX12PQ92771 950 aa7.08□□□□□ -1.28
CDH13-209ENST00000567109 IFIT3O14879 490 aaKnown RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 TBCAO75347 108 aaKnown RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 LDHCP07864 332 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TRAPPC3LQ5T215 181 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 MRPL50Q8N5N7 158 aaKnown RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 PLVAPQ9BX97 442 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 MAK16Q9BXY0 300 aaKnown RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 RBM28Q9NW13 759 aaKnown RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 TSPY3P0CV98 308 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TSPY8P0CW00 308 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 MTIF2P46199 727 aaKnown RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 HLTFQ14527 1009 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDH13-209ENST00000567109 C6orf163Q5TEZ5 329 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TCHPQ9BT92 498 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 HAUS2Q9NVX0 235 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TXNDC16Q9P2K2 825 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TPTE2Q6XPS3 522 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 CCDC63Q8NA47 563 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 BBXQ8WY36 941 aaPredicted RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 CWC25Q9NXE8 425 aaPredicted RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDH13-209ENST00000567109 ZBTB3Q9H5J0 574 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 PAFAH1B1P43034 410 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TNNI2P48788 182 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TRAF1Q13077 416 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 CCDC40Q4G0X9 1142 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 BRDTQ58F21 947 aaPredicted RBP7.07□□□□□ -1.28
CDH13-209ENST00000567109 PLBD2Q8NHP8 589 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 GSDMBQ8TAX9 411 aa7.07□□□□□ -1.28
CDH13-209ENST00000567109 TRIM6Q9C030 488 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms