RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
CAPN3-216ENST00000567071 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
CAPN3-216ENST00000567071 MAFAQ8NHW3 353 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-216ENST00000567071 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
CAPN3-216ENST00000567071 ZMYND8Q9ULU4 1186 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-216ENST00000567071 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
CAPN3-216ENST00000567071 NECAB2Q7Z6G3 386 aa12.77□□□□□ -0.37
CAPN3-216ENST00000567071 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
CAPN3-216ENST00000567071 PHACTR3Q96KR7 559 aa12.77□□□□□ -0.37
CAPN3-216ENST00000567071 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
CAPN3-216ENST00000567071 MYO1BO43795 1136 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-216ENST00000567071 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-216ENST00000567071 DCTN1Q14203 1278 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 ZNF697Q5TEC3 545 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 SLAIN1Q8ND83 568 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 FAM161BQ96MY7 647 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
CAPN3-216ENST00000567071 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
CAPN3-216ENST00000567071 SSC5DA1L4H1 1573 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 PSMC4P43686 418 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 XDHP47989 1333 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 STRIP1Q5VSL9 837 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
CAPN3-216ENST00000567071 OSBPP22059 807 aa12.74□□□□□ -0.37
CAPN3-216ENST00000567071 ATP2B4P23634 1241 aa12.74□□□□□ -0.37
CAPN3-216ENST00000567071 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAPN3-216ENST00000567071 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
CAPN3-216ENST00000567071 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-216ENST00000567071 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
CAPN3-216ENST00000567071 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
CAPN3-216ENST00000567071 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
CAPN3-216ENST00000567071 NCOR1O75376 2440 aa12.74□□□□□ -0.37
CAPN3-216ENST00000567071 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-216ENST00000567071 CETPP11597 493 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
CAPN3-216ENST00000567071 EIF4A1P60842 406 aaKnown RBP12.73□□□□□ -0.37
CAPN3-216ENST00000567071 MAP3K12Q12852 859 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 TJAP1Q5JTD0 557 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 KIAA0825Q8IV33 1275 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 EYSQ5T1H1 3165 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 ECM29Q5VYK3 1845 aa12.73□□□□□ -0.37
CAPN3-216ENST00000567071 OTOFQ9HC10 1997 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 SYN1P17600 705 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
CAPN3-216ENST00000567071 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-216ENST00000567071 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-216ENST00000567071 FAM89AQ96GI7 184 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 CSADQ9Y600 493 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
CAPN3-216ENST00000567071 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-216ENST00000567071 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.37
CAPN3-216ENST00000567071 VEZTQ9HBM0 779 aa12.71□□□□□ -0.37
CAPN3-216ENST00000567071 MED23Q9ULK4 1368 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 ADGRA2Q96PE1 1338 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 ABCB7O75027 752 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 TTLL5Q6EMB2 1281 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 ZBED3Q96IU2 234 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-216ENST00000567071 CDX2Q99626 313 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-216ENST00000567071 COA1Q9GZY4 146 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
CAPN3-216ENST00000567071 LAMA2P24043 3122 aaKnown RBP12.7□□□□□ -0.38
CAPN3-216ENST00000567071 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-216ENST00000567071 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
CAPN3-216ENST00000567071 FCGRTP55899 365 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 SNAPC2Q13487 334 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 TNFAIP1Q13829 316 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 C17orf99Q6UX52 265 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 COL4A1P02462 1669 aa12.69□□□□□ -0.38
CAPN3-216ENST00000567071 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 BTBD19C9JJ37 291 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 ADCY3O60266 1144 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 NEFMP07197 916 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 PRKCZQ05513 592 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 CCDC152Q4G0S7 254 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-216ENST00000567071 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
CAPN3-216ENST00000567071 ANXA1P04083 346 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms