RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 JAG2Q9Y219 1238 aa19.82■□□□□ 0.76
PALB2-205ENST00000567003 CLRN2A0PK11 232 aa19.81■□□□□ 0.76
PALB2-205ENST00000567003 CSF1RP07333 972 aa19.81■□□□□ 0.76
PALB2-205ENST00000567003 FLIIQ13045 1269 aa19.81■□□□□ 0.76
PALB2-205ENST00000567003 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
PALB2-205ENST00000567003 NOM1Q5C9Z4 860 aaKnown RBP19.81■□□□□ 0.76
PALB2-205ENST00000567003 CFHR5Q9BXR6 569 aa19.8■□□□□ 0.76
PALB2-205ENST00000567003 COL1A1P02452 1464 aaPredicted RBP19.79■□□□□ 0.76
PALB2-205ENST00000567003 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
PALB2-205ENST00000567003 DNAAF4Q8WXU2 420 aa19.79■□□□□ 0.76
PALB2-205ENST00000567003 SLC10A4Q96EP9 437 aa19.79■□□□□ 0.76
PALB2-205ENST00000567003 WNK4Q96J92 1243 aa19.79■□□□□ 0.76
PALB2-205ENST00000567003 BRCA2P51587 3418 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 ANKRD18BA2A2Z9 1011 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 IGF2BP3O00425 579 aaKnown RBP eCLIP19.78■□□□□ 0.76
PALB2-205ENST00000567003 MMP14P50281 582 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 CFAP100Q494V2 611 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 IFNL1Q8IU54 200 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 WWC1Q8IX03 1113 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 VEZTQ9HBM0 779 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 CHMP3Q9Y3E7 222 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 TRIM17Q9Y577 477 aa19.78■□□□□ 0.76
PALB2-205ENST00000567003 GJA5P36382 358 aa19.77■□□□□ 0.76
PALB2-205ENST00000567003 LAMB1P07942 1786 aa19.77■□□□□ 0.76
PALB2-205ENST00000567003 OTOFQ9HC10 1997 aa19.76■□□□□ 0.75
PALB2-205ENST00000567003 MANSC4A6NHS7 340 aaPredicted RBP19.76■□□□□ 0.75
PALB2-205ENST00000567003 FOXO4P98177 505 aa19.76■□□□□ 0.75
PALB2-205ENST00000567003 MAP3K11Q16584 847 aa19.76■□□□□ 0.75
PALB2-205ENST00000567003 NBPF12Q5TAG4 269 aaPredicted RBP19.76■□□□□ 0.75
PALB2-205ENST00000567003 MTMR14Q8NCE2 650 aa19.76■□□□□ 0.75
PALB2-205ENST00000567003 LINS1Q8NG48 757 aa19.76■□□□□ 0.75
PALB2-205ENST00000567003 ZNF594Q96JF6 807 aaPredicted RBP19.76■□□□□ 0.75
PALB2-205ENST00000567003 PRMT6Q96LA8 375 aaPredicted RBP19.76■□□□□ 0.75
PALB2-205ENST00000567003 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
PALB2-205ENST00000567003 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
PALB2-205ENST00000567003 F6X3S4 739 aa19.75■□□□□ 0.75
PALB2-205ENST00000567003 ALDH1A1P00352 501 aa19.75■□□□□ 0.75
PALB2-205ENST00000567003 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
PALB2-205ENST00000567003 OTOP1Q7RTM1 612 aa19.75■□□□□ 0.75
PALB2-205ENST00000567003 POTEFA5A3E0 1075 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 PPP1R12BO60237 982 aaPredicted RBP19.74■□□□□ 0.75
PALB2-205ENST00000567003 PLIN1O60240 522 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 IL1R1P14778 569 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 EPHA10Q5JZY3 1008 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 C15orf52Q6ZUT6 534 aaKnown RBP19.74■□□□□ 0.75
PALB2-205ENST00000567003 ZNF804AQ7Z570 1209 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 KIAA0100Q14667 2235 aaKnown RBP19.74■□□□□ 0.75
PALB2-205ENST00000567003 CACNA1FO60840 1977 aa19.74■□□□□ 0.75
PALB2-205ENST00000567003 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
PALB2-205ENST00000567003 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
PALB2-205ENST00000567003 RBM5P52756 815 aaKnown RBP eCLIP19.73■□□□□ 0.75
PALB2-205ENST00000567003 CAP1Q01518 475 aa19.73■□□□□ 0.75
PALB2-205ENST00000567003 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
PALB2-205ENST00000567003 CD99L2Q8TCZ2 262 aa19.73■□□□□ 0.75
PALB2-205ENST00000567003 PPP2R3BQ9Y5P8 575 aa19.73■□□□□ 0.75
PALB2-205ENST00000567003 USP2O75604 605 aaPredicted RBP19.72■□□□□ 0.75
PALB2-205ENST00000567003 CRHR2Q13324 411 aa19.72■□□□□ 0.75
PALB2-205ENST00000567003 RASA3Q14644 834 aa19.72■□□□□ 0.75
PALB2-205ENST00000567003 LMBR1LQ6UX01 489 aa19.72■□□□□ 0.75
PALB2-205ENST00000567003 CDAN1Q8IWY9 1227 aa19.72■□□□□ 0.75
PALB2-205ENST00000567003 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
PALB2-205ENST00000567003 MYO1BO43795 1136 aa19.71■□□□□ 0.75
PALB2-205ENST00000567003 INHBEP58166 350 aa19.71■□□□□ 0.75
PALB2-205ENST00000567003 SUPT20HL1Q3ZLR7 823 aa19.71■□□□□ 0.75
PALB2-205ENST00000567003 ELP3Q9H9T3 547 aa19.71■□□□□ 0.75
PALB2-205ENST00000567003 IL16Q14005 1332 aa19.71■□□□□ 0.75
PALB2-205ENST00000567003 VAMP4O75379 141 aa19.7■□□□□ 0.74
PALB2-205ENST00000567003 IREB2P48200 963 aaKnown RBP19.7■□□□□ 0.74
PALB2-205ENST00000567003 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
PALB2-205ENST00000567003 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
PALB2-205ENST00000567003 PTPN18Q99952 460 aa19.7■□□□□ 0.74
PALB2-205ENST00000567003 FKBP1AP62942 108 aaKnown RBP19.69■□□□□ 0.74
PALB2-205ENST00000567003 TAF7LQ5H9L4 462 aa19.69■□□□□ 0.74
PALB2-205ENST00000567003 CNNM1Q9NRU3 951 aa19.69■□□□□ 0.74
PALB2-205ENST00000567003 PTPN22Q9Y2R2 807 aa19.69■□□□□ 0.74
PALB2-205ENST00000567003 ARAP2Q8WZ64 1704 aa19.68■□□□□ 0.74
PALB2-205ENST00000567003 RBBP6Q7Z6E9 1792 aaKnown RBP19.68■□□□□ 0.74
PALB2-205ENST00000567003 GYG1P46976 350 aa19.68■□□□□ 0.74
PALB2-205ENST00000567003 LDHAL6AQ6ZMR3 332 aa19.68■□□□□ 0.74
PALB2-205ENST00000567003 ERO1AQ96HE7 468 aa19.68■□□□□ 0.74
PALB2-205ENST00000567003 TDRD3Q9H7E2 651 aaKnown RBP19.68■□□□□ 0.74
PALB2-205ENST00000567003 ZNF70Q9UC06 446 aaPredicted RBP19.68■□□□□ 0.74
PALB2-205ENST00000567003 SPDYE2Q495Y8 402 aa19.67■□□□□ 0.74
PALB2-205ENST00000567003 MFSD14BQ5SR56 506 aa19.67■□□□□ 0.74
PALB2-205ENST00000567003 ANKRD13AQ8IZ07 590 aa19.67■□□□□ 0.74
PALB2-205ENST00000567003 OPTNQ96CV9 577 aa19.67■□□□□ 0.74
PALB2-205ENST00000567003 TTF2Q9UNY4 1162 aaKnown RBP19.67■□□□□ 0.74
PALB2-205ENST00000567003 GRIK5Q16478 980 aa19.66■□□□□ 0.74
PALB2-205ENST00000567003 CCDC57Q2TAC2 916 aa19.66■□□□□ 0.74
PALB2-205ENST00000567003 PUS3Q9BZE2 481 aaKnown RBP19.66■□□□□ 0.74
PALB2-205ENST00000567003 EFCC1Q9HA90 598 aa19.66■□□□□ 0.74
PALB2-205ENST00000567003 FAM205AQ6ZU69 1335 aa19.66■□□□□ 0.74
PALB2-205ENST00000567003 TCP10L2B9ZVM9 353 aa19.65■□□□□ 0.74
PALB2-205ENST00000567003 GRM8O00222 908 aa19.65■□□□□ 0.74
PALB2-205ENST00000567003 EN2P19622 333 aaPredicted RBP19.65■□□□□ 0.74
PALB2-205ENST00000567003 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
PALB2-205ENST00000567003 TDRD7Q8NHU6 1098 aaKnown RBP19.65■□□□□ 0.74
PALB2-205ENST00000567003 TEPSINQ96N21 525 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms