RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SERPINC1P01008 464 aa28.88■■■□□ 2.21
FANCA-221ENST00000566889 SIL1Q9H173 461 aa28.88■■■□□ 2.21
FANCA-221ENST00000566889 POLR3EQ9NVU0 708 aa28.88■■■□□ 2.21
FANCA-221ENST00000566889 COL15A1P39059 1388 aa28.88■■■□□ 2.21
FANCA-221ENST00000566889 H3BQF6 201 aa28.88■■■□□ 2.21
FANCA-221ENST00000566889 HSD3B7Q9H2F3 369 aa28.88■■■□□ 2.21
FANCA-221ENST00000566889 MED1Q15648 1581 aaPredicted RBP28.87■■■□□ 2.21
FANCA-221ENST00000566889 POTEB2H3BUK9 544 aa28.87■■■□□ 2.21
FANCA-221ENST00000566889 ZNF202O95125 648 aa28.87■■■□□ 2.21
FANCA-221ENST00000566889 GTF2A1P52655 376 aaPredicted RBP28.87■■■□□ 2.21
FANCA-221ENST00000566889 TMEM139Q8IV31 216 aa28.87■■■□□ 2.21
FANCA-221ENST00000566889 BIN1O00499 593 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 MAGEA9P43362 315 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 MRC1P22897 1456 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 NWD1Q149M9 1564 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 TUBB4BP68371 445 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 MYL5Q02045 173 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 CFAP100Q494V2 611 aa28.86■■■□□ 2.21
FANCA-221ENST00000566889 DBF4Q9UBU7 674 aaPredicted RBP28.86■■■□□ 2.21
FANCA-221ENST00000566889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.86■■■□□ 2.21
FANCA-221ENST00000566889 EIF3JO75822 258 aaKnown RBP28.85■■■□□ 2.21
FANCA-221ENST00000566889 ATP1A3P13637 1013 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 APOBRQ0VD83 1088 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 KIFC2Q96AC6 838 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 WDR24Q96S15 920 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 MAP3K2Q9Y2U5 619 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 UTYO14607 1347 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 DIP2AQ14689 1571 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 SPTLC2O15270 562 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 GYS2P54840 703 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 ZNF274Q96GC6 653 aaPredicted RBP28.85■■■□□ 2.21
FANCA-221ENST00000566889 LRRC2Q9BYS8 371 aa28.85■■■□□ 2.21
FANCA-221ENST00000566889 CARMIL3Q8ND23 1372 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 STX10O60499 249 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 KSR2Q6VAB6 950 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 HDXQ7Z353 690 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 MKRN1Q9UHC7 482 aaKnown RBP28.84■■■□□ 2.21
FANCA-221ENST00000566889 KDM3BQ7LBC6 1761 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 ATP5JP18859 108 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 MCMDC2Q4G0Z9 681 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 SLC26A8Q96RN1 970 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 TUBE1Q9UJT0 475 aa28.84■■■□□ 2.21
FANCA-221ENST00000566889 TSPOAP1O95153 1857 aa28.83■■■□□ 2.21
FANCA-221ENST00000566889 CMA1P23946 247 aa28.83■■■□□ 2.21
FANCA-221ENST00000566889 CERS3Q8IU89 383 aa28.83■■■□□ 2.21
FANCA-221ENST00000566889 FAM177A1Q8N128 213 aaPredicted RBP28.83■■■□□ 2.21
FANCA-221ENST00000566889 BAG1Q99933 345 aaPredicted RBP28.83■■■□□ 2.21
FANCA-221ENST00000566889 SLIT1O75093 1534 aa28.83■■■□□ 2.21
FANCA-221ENST00000566889 USP5P45974 858 aa28.82■■■□□ 2.2
FANCA-221ENST00000566889 EXOSC10Q01780 885 aaKnown RBP28.82■■■□□ 2.2
FANCA-221ENST00000566889 DPF2Q92785 391 aa28.82■■■□□ 2.2
FANCA-221ENST00000566889 HDGFP51858 240 aaKnown RBP28.82■■■□□ 2.2
FANCA-221ENST00000566889 GUCY1B3Q02153 619 aa28.82■■■□□ 2.2
FANCA-221ENST00000566889 TTC31Q49AM3 519 aaPredicted RBP28.82■■■□□ 2.2
FANCA-221ENST00000566889 ROBO2Q9HCK4 1378 aa28.82■■■□□ 2.2
FANCA-221ENST00000566889 GRM8O00222 908 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 STOX1Q6ZVD7 989 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 BRAPQ7Z569 592 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 SUCLG2Q96I99 432 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 VPS18Q9P253 973 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 CLIC4Q9Y696 253 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 ERLIN1O75477 346 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 CCT2P78371 535 aaKnown RBP28.81■■■□□ 2.2
FANCA-221ENST00000566889 RGS22Q8NE09 1264 aa28.81■■■□□ 2.2
FANCA-221ENST00000566889 ZNF609O15014 1411 aa28.8■■■□□ 2.2
FANCA-221ENST00000566889 BICC1Q9H694 974 aaKnown RBP28.8■■■□□ 2.2
FANCA-221ENST00000566889 AGLP35573 1532 aa28.8■■■□□ 2.2
FANCA-221ENST00000566889 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.8■■■□□ 2.2
FANCA-221ENST00000566889 TBX2Q13207 712 aaPredicted RBP28.79■■■□□ 2.2
FANCA-221ENST00000566889 BEND6Q5SZJ8 279 aaPredicted RBP28.79■■■□□ 2.2
FANCA-221ENST00000566889 SRGAP1Q7Z6B7 1085 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 LINS1Q8NG48 757 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 DHX58Q96C10 678 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 SEC62Q99442 399 aaKnown RBP28.79■■■□□ 2.2
FANCA-221ENST00000566889 RAB21Q9UL25 225 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 TUBB2AQ13885 445 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 KAZALD1Q96I82 304 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 TUBB2BQ9BVA1 445 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 PDE11AQ9HCR9 933 aa28.79■■■□□ 2.2
FANCA-221ENST00000566889 LAMA4Q16363 1823 aa28.78■■■□□ 2.2
FANCA-221ENST00000566889 PFKFB1P16118 471 aa28.78■■■□□ 2.2
FANCA-221ENST00000566889 PDIA3P30101 505 aaKnown RBP28.78■■■□□ 2.2
FANCA-221ENST00000566889 CHMP4BP1P59074 171 aa28.78■■■□□ 2.2
FANCA-221ENST00000566889 ANXA1P04083 346 aa28.78■■■□□ 2.2
FANCA-221ENST00000566889 HOXC9P31274 260 aa28.78■■■□□ 2.2
FANCA-221ENST00000566889 CEP112Q8N8E3 955 aa28.78■■■□□ 2.2
FANCA-221ENST00000566889 GUCY2CP25092 1073 aa28.77■■■□□ 2.2
FANCA-221ENST00000566889 PPM1EQ8WY54 764 aa28.77■■■□□ 2.2
FANCA-221ENST00000566889 JRKLQ9Y4A0 524 aa28.77■■■□□ 2.2
FANCA-221ENST00000566889 CWF19L2Q2TBE0 894 aaKnown RBP28.77■■■□□ 2.2
FANCA-221ENST00000566889 AXDND1Q5T1B0 1012 aaPredicted RBP28.77■■■□□ 2.2
FANCA-221ENST00000566889 OLFM4Q6UX06 510 aa28.77■■■□□ 2.2
FANCA-221ENST00000566889 MSANTD4Q8NCY6 345 aa28.77■■■□□ 2.2
FANCA-221ENST00000566889 EDC3Q96F86 508 aaKnown RBP28.77■■■□□ 2.2
FANCA-221ENST00000566889 NCOA5Q9HCD5 579 aaKnown RBP28.77■■■□□ 2.2
FANCA-221ENST00000566889 MYSM1Q5VVJ2 828 aa28.76■■■□□ 2.19
FANCA-221ENST00000566889 CCDC129Q6ZRS4 1044 aa28.76■■■□□ 2.19
FANCA-221ENST00000566889 SH3TC1Q8TE82 1336 aa28.76■■■□□ 2.19
FANCA-221ENST00000566889 FDPSP14324 419 aaKnown RBP28.75■■■□□ 2.19
FANCA-221ENST00000566889 SYNE3Q6ZMZ3 975 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms