RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 CPLX1O14810 134 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 NDUFA8P51970 172 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 ANKRD7Q92527 254 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 CCDC69A6NI79 296 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 GOLGA8BA8MQT2 603 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 ADORA1P30542 326 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
CDH1-209ENST00000566510 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
CDH1-209ENST00000566510 BIN1O00499 593 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 PRC1O43663 620 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 CTNNA3Q9UI47 895 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 PTPN14Q15678 1187 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 FMR1NBQ8N0W7 255 aaPredicted RBP16.6■□□□□ 0.25
CDH1-209ENST00000566510 CHMP4CQ96CF2 233 aa16.6■□□□□ 0.25
CDH1-209ENST00000566510 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
CDH1-209ENST00000566510 FGAP02671 866 aa16.59■□□□□ 0.25
CDH1-209ENST00000566510 SYNE3Q6ZMZ3 975 aa16.59■□□□□ 0.25
CDH1-209ENST00000566510 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
CDH1-209ENST00000566510 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
CDH1-209ENST00000566510 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
CDH1-209ENST00000566510 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
CDH1-209ENST00000566510 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.25
CDH1-209ENST00000566510 NEMFO60524 1076 aa16.58■□□□□ 0.25
CDH1-209ENST00000566510 SMC2O95347 1197 aa16.58■□□□□ 0.25
CDH1-209ENST00000566510 ISM2Q6H9L7 571 aa16.58■□□□□ 0.25
CDH1-209ENST00000566510 PI16Q6UXB8 463 aa16.58■□□□□ 0.25
CDH1-209ENST00000566510 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.25
CDH1-209ENST00000566510 DPCR1Q3MIW9 517 aa16.58■□□□□ 0.24
CDH1-209ENST00000566510 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
CDH1-209ENST00000566510 PRDM4Q9UKN5 801 aa16.58■□□□□ 0.24
CDH1-209ENST00000566510 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
CDH1-209ENST00000566510 SPTLC2O15270 562 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 ZAP70P43403 619 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 SCARF1Q14162 830 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
CDH1-209ENST00000566510 ZNF213O14771 459 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
CDH1-209ENST00000566510 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 KIAA1468Q9P260 1216 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDH1-209ENST00000566510 ZHX1Q9UKY1 873 aaPredicted RBP16.57■□□□□ 0.24
CDH1-209ENST00000566510 V9GYY5 206 aaPredicted RBP16.57■□□□□ 0.24
CDH1-209ENST00000566510 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
CDH1-209ENST00000566510 CIAO1O76071 339 aa16.56■□□□□ 0.24
CDH1-209ENST00000566510 FBXO18Q8NFZ0 1043 aa16.56■□□□□ 0.24
CDH1-209ENST00000566510 NCOA7Q8NI08 942 aa16.56■□□□□ 0.24
CDH1-209ENST00000566510 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
CDH1-209ENST00000566510 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
CDH1-209ENST00000566510 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
CDH1-209ENST00000566510 RBM6P78332 1123 aaKnown RBP16.56■□□□□ 0.24
CDH1-209ENST00000566510 APPP05067 770 aa16.55■□□□□ 0.24
CDH1-209ENST00000566510 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
CDH1-209ENST00000566510 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
CDH1-209ENST00000566510 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
CDH1-209ENST00000566510 FOXP2O15409 715 aa16.55■□□□□ 0.24
CDH1-209ENST00000566510 CCZ1BP86790 482 aa16.55■□□□□ 0.24
CDH1-209ENST00000566510 CCZ1P86791 482 aaPredicted RBP16.55■□□□□ 0.24
CDH1-209ENST00000566510 GNL2Q13823 731 aaKnown RBP16.55■□□□□ 0.24
CDH1-209ENST00000566510 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
CDH1-209ENST00000566510 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 GPAA1O43292 621 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 ZNF202O95125 648 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 ZFYP08048 801 aaPredicted RBP16.54■□□□□ 0.24
CDH1-209ENST00000566510 RXRAP19793 462 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 TMC6Q7Z403 805 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 ATG3Q9NT62 314 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 TRDNQ13061 729 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 XPO4Q9C0E2 1151 aaKnown RBP16.54■□□□□ 0.24
CDH1-209ENST00000566510 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
CDH1-209ENST00000566510 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
CDH1-209ENST00000566510 MB21D2Q8IYB1 491 aaPredicted RBP16.53■□□□□ 0.24
CDH1-209ENST00000566510 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
CDH1-209ENST00000566510 APPBP2Q92624 585 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
CDH1-209ENST00000566510 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 EVCP57679 992 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 GSDMDP57764 484 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 ANTXR2P58335 489 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 TPM4P67936 248 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 DMTNQ08495 405 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 BRAPQ7Z569 592 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDH1-209ENST00000566510 AIFM3Q96NN9 605 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 DENND2AQ9ULE3 1009 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 NPHP1O15259 732 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 IGSF3O75054 1194 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms