RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 POLR2AP24928 1970 aaKnown RBP10.04□□□□□ -0.8
CDH13-208ENST00000566333 VIL1P09327 827 aaKnown RBP10.03□□□□□ -0.8
CDH13-208ENST00000566333 MCAMP43121 646 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 SCNN1DP51172 638 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 NUCB1Q02818 461 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 CIAPIN1Q6FI81 312 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 GPC2Q8N158 579 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 L3MBTL3Q96JM7 780 aaPredicted RBP10.03□□□□□ -0.8
CDH13-208ENST00000566333 GMLQ99445 158 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 MXD3Q9BW11 206 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 JAG2Q9Y219 1238 aa10.03□□□□□ -0.8
CDH13-208ENST00000566333 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.8
CDH13-208ENST00000566333 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 GLTPD2A6NH11 291 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 SEMA3EO15041 775 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 DDNO94850 711 aaPredicted RBP10.02□□□□□ -0.81
CDH13-208ENST00000566333 HOXD11P31277 338 aaPredicted RBP10.02□□□□□ -0.81
CDH13-208ENST00000566333 EIF6P56537 245 aaKnown RBP10.02□□□□□ -0.81
CDH13-208ENST00000566333 GTF2IP78347 998 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 GRIK5Q16478 980 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 ANKRD45Q5TZF3 282 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 STRIP1Q5VSL9 837 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 TSHZ3Q63HK5 1081 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 VPS37DQ86XT2 251 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
CDH13-208ENST00000566333 ZNF512BQ96KM6 892 aaPredicted RBP10.02□□□□□ -0.81
CDH13-208ENST00000566333 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
CDH13-208ENST00000566333 SHTN1A0MZ66 631 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 POTECB2RU33 542 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 G3V3G9 751 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
CDH13-208ENST00000566333 PDE4AP27815 886 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 GMPSP49915 693 aaPredicted RBP10.01□□□□□ -0.81
CDH13-208ENST00000566333 CHAF1AQ13111 956 aaPredicted RBP10.01□□□□□ -0.81
CDH13-208ENST00000566333 DCAF8Q5TAQ9 597 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
CDH13-208ENST00000566333 CENPQQ7L2Z9 268 aaPredicted RBP10.01□□□□□ -0.81
CDH13-208ENST00000566333 CHD1LQ86WJ1 897 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 HMG20BQ9P0W2 317 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
CDH13-208ENST00000566333 GJA3Q9Y6H8 435 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 SALL1Q9NSC2 1324 aa10.01□□□□□ -0.81
CDH13-208ENST00000566333 UQCRFS1P1P0C7P4 283 aa10□□□□□ -0.81
CDH13-208ENST00000566333 MX1P20591 662 aa10□□□□□ -0.81
CDH13-208ENST00000566333 FKBP1AP62942 108 aaKnown RBP10□□□□□ -0.81
CDH13-208ENST00000566333 TNIP1Q15025 636 aa10□□□□□ -0.81
CDH13-208ENST00000566333 MFSD14BQ5SR56 506 aa10□□□□□ -0.81
CDH13-208ENST00000566333 TTC39AQ5SRH9 613 aa10□□□□□ -0.81
CDH13-208ENST00000566333 GORABQ5T7V8 394 aa10□□□□□ -0.81
CDH13-208ENST00000566333 TTLL5Q6EMB2 1281 aa10□□□□□ -0.81
CDH13-208ENST00000566333 SPATA5Q8NB90 893 aa10□□□□□ -0.81
CDH13-208ENST00000566333 PI4K2BQ8TCG2 481 aa10□□□□□ -0.81
CDH13-208ENST00000566333 CCDC136Q96JN2 1154 aa10□□□□□ -0.81
CDH13-208ENST00000566333 BCL11AQ9H165 835 aa10□□□□□ -0.81
CDH13-208ENST00000566333 GNL3LQ9NVN8 582 aaKnown RBP10□□□□□ -0.81
CDH13-208ENST00000566333 PPP4R2Q9NY27 417 aa10□□□□□ -0.81
CDH13-208ENST00000566333 DENND2AQ9ULE3 1009 aa10□□□□□ -0.81
CDH13-208ENST00000566333 NDUFB9Q9Y6M9 179 aa10□□□□□ -0.81
CDH13-208ENST00000566333 MYO3BQ8WXR4 1341 aa10□□□□□ -0.81
CDH13-208ENST00000566333 NAV1Q8NEY1 1877 aa10□□□□□ -0.81
CDH13-208ENST00000566333 ATP5JP18859 108 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 RPS12P25398 132 aaKnown RBP9.99□□□□□ -0.81
CDH13-208ENST00000566333 PRDX5P30044 214 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 ZAP70P43403 619 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 CCDC158Q5M9N0 1113 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 AGBL3Q8NEM8 1001 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 ZNF384Q8TF68 577 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDH13-208ENST00000566333 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 NMRK2Q9NPI5 230 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 SNRKQ9NRH2 765 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 GPRC5DQ9NZD1 345 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 STAP2Q9UGK3 403 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 TTC41PQ6P2S7 1318 aa9.99□□□□□ -0.81
CDH13-208ENST00000566333 TRPM7Q96QT4 1865 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 FRAT2O75474 233 aaPredicted RBP9.98□□□□□ -0.81
CDH13-208ENST00000566333 EGFRP00533 1210 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 CYP2E1P05181 493 aaPredicted RBP9.98□□□□□ -0.81
CDH13-208ENST00000566333 YY1P25490 414 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 EPS15P42566 896 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 PDE1AP54750 535 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 ZNF280AP59817 542 aaPredicted RBP9.98□□□□□ -0.81
CDH13-208ENST00000566333 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 MICALL2Q8IY33 904 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 WDR66Q8TBY9 1149 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 ZNF526Q8TF50 670 aaPredicted RBP9.98□□□□□ -0.81
CDH13-208ENST00000566333 TBC1D22AQ8WUA7 517 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 DPF2Q92785 391 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 EDC3Q96F86 508 aaKnown RBP9.98□□□□□ -0.81
CDH13-208ENST00000566333 ANTXR1Q9H6X2 564 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 PIH1D3Q9NQM4 214 aaKnown RBP9.98□□□□□ -0.81
CDH13-208ENST00000566333 AOX1Q06278 1338 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 PAPPA2Q9BXP8 1791 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 SIPA1L1O43166 1804 aa9.98□□□□□ -0.81
CDH13-208ENST00000566333 LAMB1P07942 1786 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms