RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 ANAPC15P60006 121 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 GSTO1P78417 241 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 RASGRF1Q13972 1273 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 SUGT1Q9Y2Z0 365 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 MAST3O60307 1309 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 SALL1Q9NSC2 1324 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
SF3B3-207ENST00000566095 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-207ENST00000566095 KCNA3P22001 575 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 CHMLP26374 656 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 ZAP70P43403 619 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 BECN1Q14457 450 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 ERICH6Q7L0X2 663 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 TDRD7Q8NHU6 1098 aaKnown RBP11.82□□□□□ -0.52
SF3B3-207ENST00000566095 C7orf43Q8WVR3 580 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
SF3B3-207ENST00000566095 TAOK3Q9H2K8 898 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 CD209Q9NNX6 404 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 CACNA1SQ13698 1873 aa11.82□□□□□ -0.52
SF3B3-207ENST00000566095 PPIP5K2O43314 1243 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 IDH1O75874 414 aaKnown RBP11.81□□□□□ -0.52
SF3B3-207ENST00000566095 LDHCP07864 332 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 JDP2Q8WYK2 163 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 SNX21Q969T3 373 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 ESYT1Q9BSJ8 1104 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 RAI14Q9P0K7 980 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
SF3B3-207ENST00000566095 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 SLX4Q8IY92 1834 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 COL4A1P02462 1669 aa11.81□□□□□ -0.52
SF3B3-207ENST00000566095 LTBP1Q14766 1721 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 LDHBP07195 334 aaKnown RBP11.8□□□□□ -0.52
SF3B3-207ENST00000566095 MMP14P50281 582 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 FKBP1AP62942 108 aaKnown RBP11.8□□□□□ -0.52
SF3B3-207ENST00000566095 CHAF1AQ13111 956 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-207ENST00000566095 MCMDC2Q4G0Z9 681 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
SF3B3-207ENST00000566095 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 LARGE2Q8N3Y3 721 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 APPBP2Q92624 585 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 FAM205AQ6ZU69 1335 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 MYO3BQ8WXR4 1341 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
SF3B3-207ENST00000566095 SNAP23O00161 211 aa11.79□□□□□ -0.52
SF3B3-207ENST00000566095 CYP2E1P05181 493 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-207ENST00000566095 GNAT2P19087 354 aa11.79□□□□□ -0.52
SF3B3-207ENST00000566095 SLC9C2Q5TAH2 1124 aa11.79□□□□□ -0.52
SF3B3-207ENST00000566095 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
SF3B3-207ENST00000566095 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
SF3B3-207ENST00000566095 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
SF3B3-207ENST00000566095 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-207ENST00000566095 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 SGSM2O43147 1006 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 ECE2O60344 883 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 SEC24BO95487 1268 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 BAG3O95817 575 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 PLCG2P16885 1265 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 IARSP41252 1262 aaKnown RBP11.78□□□□□ -0.52
SF3B3-207ENST00000566095 SCARF1Q14162 830 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 STRIP1Q5VSL9 837 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 NAA16Q6N069 864 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-207ENST00000566095 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 ANO2Q9NQ90 1003 aa11.78□□□□□ -0.52
SF3B3-207ENST00000566095 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.52
SF3B3-207ENST00000566095 BRCA1P38398 1863 aaKnown RBP11.77□□□□□ -0.53
SF3B3-207ENST00000566095 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 PDE6AP16499 860 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 KLRK1P26718 216 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 ADD2P35612 726 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 NMIQ13287 307 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-207ENST00000566095 RABEP1Q15276 862 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 AOC3Q16853 763 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 ZMYM1Q5SVZ6 1142 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 TXNRD3Q86VQ6 643 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 PIH1D3Q9NQM4 214 aaKnown RBP11.77□□□□□ -0.53
SF3B3-207ENST00000566095 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 IQSEC3Q9UPP2 1182 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-207ENST00000566095 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
SF3B3-207ENST00000566095 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-207ENST00000566095 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-207ENST00000566095 CYP7A1P22680 504 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms