RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 KBTBD3Q8NAB2 608 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 CYP21A2P08686 494 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 PGBD1Q96JS3 809 aa12.07□□□□□ -0.48
USB1-212ENST00000566082 CLSTN1O94985 981 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 GPTP24298 496 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
USB1-212ENST00000566082 NLRP12P59046 1061 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 CTAGE15A4D2H0 777 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 KIAA0754O94854 1291 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 CTAGE8P0CG41 777 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 IL15P40933 162 aaPredicted RBP12.06□□□□□ -0.48
USB1-212ENST00000566082 DNA2P51530 1060 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 MTX1Q13505 466 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 CTAGE6Q86UF2 777 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 CTAGE4Q8IX94 777 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
USB1-212ENST00000566082 E7EWF7 191 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 POLA2Q14181 598 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 DHX58Q96C10 678 aa12.06□□□□□ -0.48
USB1-212ENST00000566082 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 GOLGA8FQ08AF8 430 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 GOLGA8DPQ0D2H9 430 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 GCKRQ14397 625 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 MAP9Q49MG5 647 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 SLC9C2Q5TAH2 1124 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 ATP5JP18859 108 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 IP6K1Q92551 441 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 ABCC3O15438 1527 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 RAD21O60216 631 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 MATR3P43243 847 aaKnown RBP eCLIP12.05□□□□□ -0.482e-10■■■□□ 19.1
USB1-212ENST00000566082 ADKP55263 362 aaKnown RBP12.05□□□□□ -0.48
USB1-212ENST00000566082 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 CTR9Q6PD62 1173 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
USB1-212ENST00000566082 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 ZNF594Q96JF6 807 aaPredicted RBP12.05□□□□□ -0.48
USB1-212ENST00000566082 PPP1R13BQ96KQ4 1090 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
USB1-212ENST00000566082 YEATS4O95619 227 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 PFKFB1P16118 471 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 IBSPP21815 317 aaPredicted RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 RESTQ13127 1097 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 PHKBQ93100 1093 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 CTAGE9A4FU28 777 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 PFKFB2O60825 505 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 SEC31AO94979 1220 aaKnown RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 ZFYP08048 801 aaPredicted RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 PNOCQ13519 176 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 TERF2Q15554 542 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 KMT5BQ4FZB7 885 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 KCNH3Q9ULD8 1083 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 CLIC4Q9Y696 253 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 YEATS2Q9ULM3 1422 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 A0A1B0GUL7 405 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 SASH1O94885 1247 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 DHX37Q8IY37 1157 aaKnown RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 TANGO6Q9C0B7 1094 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 RASSF4Q9H2L5 321 aa12.04□□□□□ -0.48
USB1-212ENST00000566082 DBNLQ9UJU6 430 aaKnown RBP12.04□□□□□ -0.48
USB1-212ENST00000566082 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
USB1-212ENST00000566082 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
USB1-212ENST00000566082 RDXP35241 583 aaKnown RBP12.03□□□□□ -0.48
USB1-212ENST00000566082 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 CHRNA2Q15822 529 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 CEP112Q8N8E3 955 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 NSUN7Q8NE18 718 aaKnown RBP12.03□□□□□ -0.48
USB1-212ENST00000566082 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
USB1-212ENST00000566082 AP5Z1O43299 807 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 CDC25BP30305 580 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 MAP3K12Q12852 859 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
USB1-212ENST00000566082 KANK3Q6NY19 840 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 ZNF790Q6PG37 636 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 PLA2G4DQ86XP0 818 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
USB1-212ENST00000566082 KCNA6P17658 529 aa12.02□□□□□ -0.48
USB1-212ENST00000566082 SYCP1Q15431 976 aa12.02□□□□□ -0.48
USB1-212ENST00000566082 MFSD6Q6ZSS7 791 aa12.02□□□□□ -0.48
USB1-212ENST00000566082 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.48
USB1-212ENST00000566082 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.48
USB1-212ENST00000566082 FANCLQ9NW38 375 aa12.02□□□□□ -0.48
USB1-212ENST00000566082 GUCA1BQ9UMX6 200 aa12.02□□□□□ -0.48
USB1-212ENST00000566082 AKR1B15C9JRZ8 316 aaPredicted RBP12.02□□□□□ -0.49
USB1-212ENST00000566082 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms