RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 NYXQ9GZU5 481 aa15.41■□□□□ 0.06
CX3CL1-204ENST00000565912 SYT1P21579 422 aa15.41■□□□□ 0.06
CX3CL1-204ENST00000565912 HSPA4P34932 840 aa15.41■□□□□ 0.06
CX3CL1-204ENST00000565912 MCM7P33993 719 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 KRT2P35908 639 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 MCM6Q14566 821 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 CALML3P27482 149 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 HS2ST1Q7LGA3 356 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 MAGEB6Q8N7X4 407 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 MSH6P52701 1360 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 UBAP1LF5GYI3 381 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 SPTLC2O15270 562 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 STX17P56962 302 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 DNM1Q05193 864 aaKnown RBP15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 TPTE2Q6XPS3 522 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 PLIN2Q99541 437 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 RTL1A6NKG5 1358 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 JAG2Q9Y219 1238 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
CX3CL1-204ENST00000565912 PSMC4P43686 418 aa15.39■□□□□ 0.06
CX3CL1-204ENST00000565912 ATP8B2P98198 1209 aa15.39■□□□□ 0.06
CX3CL1-204ENST00000565912 CCDC42Q96M95 316 aa15.39■□□□□ 0.06
CX3CL1-204ENST00000565912 TFCP2L1Q9NZI6 479 aa15.39■□□□□ 0.06
CX3CL1-204ENST00000565912 PARP3Q9Y6F1 533 aa15.39■□□□□ 0.06
CX3CL1-204ENST00000565912 LMOD1P29536 600 aaPredicted RBP15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 NEK11Q8NG66 645 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 BACH1O14867 736 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 ZBTB16Q05516 673 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 FAM200AQ8TCP9 573 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 GNAT2P19087 354 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 KRT83P78385 493 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 UBXN1Q04323 297 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 ARHGAP45Q92619 1136 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 CAPZA3Q96KX2 299 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 SELENOSQ9BQE4 189 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 ARFGAP3Q9NP61 516 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 AKAP4Q5JQC9 854 aa15.39■□□□□ 0.05
CX3CL1-204ENST00000565912 ANKRD36BQ8N2N9 1353 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 CTAGE9A4FU28 777 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 RNF113AO15541 343 aaKnown RBP15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 F13A1P00488 732 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 PLCG2P16885 1265 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 GPATCH11Q8N954 259 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 SMIM23A6NLE4 172 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 BICDL2A1A5D9 508 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 APOBRQ0VD83 1088 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 HDAC1Q13547 482 aaPredicted RBP15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 C16orf71Q8IYS4 520 aaPredicted RBP15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 CEP83Q9Y592 693 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 KRT86O43790 486 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 STMN4Q9H169 189 aaPredicted RBP15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 TXNDC16Q9P2K2 825 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 ATP6V0A2Q9Y487 856 aa15.38■□□□□ 0.05
CX3CL1-204ENST00000565912 IRS4O14654 1257 aaPredicted RBP15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 SMC6Q96SB8 1091 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 SRRTQ9BXP5 876 aaKnown RBP15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 MSANTD4Q8NCY6 345 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 PRIMPOLQ96LW4 560 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 WDR62O43379 1518 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 OPA1O60313 960 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 POLD1P28340 1107 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 GUCA1BQ9UMX6 200 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 LDHBP07195 334 aaKnown RBP15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 RXRAP19793 462 aa15.37■□□□□ 0.05
CX3CL1-204ENST00000565912 TOM1O60784 492 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 MNAT1P51948 309 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 GNA11P29992 359 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 RSPH14Q9UHP6 348 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 FAM169AQ9Y6X4 670 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 MAP7D1Q3KQU3 841 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 DTHD1Q6ZMT9 781 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 NFATC2IPQ8NCF5 419 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 CABLES1Q8TDN4 633 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 ZBTB9Q96C00 473 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 LRRC59Q96AG4 307 aaKnown RBP15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 PODXL2Q9NZ53 605 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 CCDC25Q86WR0 208 aa15.36■□□□□ 0.05
CX3CL1-204ENST00000565912 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 KARSQ15046 597 aaKnown RBP15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 RAPGEF1Q13905 1077 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 DCAF17Q5H9S7 520 aaPredicted RBP15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 CCDC129Q6ZRS4 1044 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 MRPL50Q8N5N7 158 aaKnown RBP15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 PPP1R9BQ96SB3 815 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 TFCP2Q12800 502 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 IFT81Q8WYA0 676 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms