RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PIH1D3Q9NQM4 214 aaKnown RBP22.64■■□□□ 1.21
COMMD4-213ENST00000565834 PDS5AQ29RF7 1337 aaKnown RBP22.63■■□□□ 1.21
COMMD4-213ENST00000565834 RAD50Q92878 1312 aa22.63■■□□□ 1.21
COMMD4-213ENST00000565834 IL25Q9H293 177 aa22.63■■□□□ 1.21
COMMD4-213ENST00000565834 A0A0D9SFI3 127 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 RNF113AO15541 343 aaKnown RBP22.62■■□□□ 1.21
COMMD4-213ENST00000565834 ZFYP08048 801 aaPredicted RBP22.62■■□□□ 1.21
COMMD4-213ENST00000565834 C22orf23Q9BZE7 217 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 PIM2Q9P1W9 311 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 IDH1O75874 414 aaKnown RBP22.62■■□□□ 1.21
COMMD4-213ENST00000565834 WASHC4Q2M389 1173 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 ZSCAN25Q6NSZ9 544 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 TBC1D32Q96NH3 1257 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 EYA3Q99504 573 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 ANO2Q9NQ90 1003 aa22.62■■□□□ 1.21
COMMD4-213ENST00000565834 C21orf2O43822 256 aa22.61■■□□□ 1.21
COMMD4-213ENST00000565834 TDRD7Q8NHU6 1098 aaKnown RBP22.61■■□□□ 1.21
COMMD4-213ENST00000565834 ZC3H12CQ9C0D7 883 aaKnown RBP22.61■■□□□ 1.21
COMMD4-213ENST00000565834 GRIPAP1Q4V328 841 aa22.6■■□□□ 1.21
COMMD4-213ENST00000565834 CD209Q9NNX6 404 aa22.6■■□□□ 1.21
COMMD4-213ENST00000565834 SNED1Q8TER0 1413 aa22.6■■□□□ 1.21
COMMD4-213ENST00000565834 RIMBP2O15034 1052 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 CHGBP05060 677 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 MAP3K12Q12852 859 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 CHAF1AQ13111 956 aaPredicted RBP22.59■■□□□ 1.21
COMMD4-213ENST00000565834 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 ZMYM1Q5SVZ6 1142 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 KIAA1211Q6ZU35 1233 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 USP26Q9BXU7 913 aa22.59■■□□□ 1.21
COMMD4-213ENST00000565834 IL1R1P14778 569 aa22.58■■□□□ 1.21
COMMD4-213ENST00000565834 SLC9C2Q5TAH2 1124 aa22.58■■□□□ 1.21
COMMD4-213ENST00000565834 RTFDC1Q9BY42 306 aaPredicted RBP22.58■■□□□ 1.21
COMMD4-213ENST00000565834 HELLSQ9NRZ9 838 aa22.58■■□□□ 1.21
COMMD4-213ENST00000565834 LRP2BPQ9P2M1 347 aa22.58■■□□□ 1.21
COMMD4-213ENST00000565834 MCMDC2Q4G0Z9 681 aa22.58■■□□□ 1.2
COMMD4-213ENST00000565834 DALRD3Q5D0E6 543 aaKnown RBP22.58■■□□□ 1.2
COMMD4-213ENST00000565834 COA1Q9GZY4 146 aa22.58■■□□□ 1.2
COMMD4-213ENST00000565834 ABCF2Q9UG63 623 aa22.58■■□□□ 1.2
COMMD4-213ENST00000565834 ADD2P35612 726 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 SLFNL1Q499Z3 407 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 SOGA3Q5TF21 947 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 SUPT20HQ8NEM7 779 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 WWC3Q9ULE0 1092 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
COMMD4-213ENST00000565834 EPB41L2O43491 1005 aaKnown RBP22.56■■□□□ 1.2
COMMD4-213ENST00000565834 PDE6AP16499 860 aa22.56■■□□□ 1.2
COMMD4-213ENST00000565834 RBM25P49756 843 aaKnown RBP22.56■■□□□ 1.2
COMMD4-213ENST00000565834 WDR66Q8TBY9 1149 aa22.56■■□□□ 1.2
COMMD4-213ENST00000565834 APPBP2Q92624 585 aa22.56■■□□□ 1.2
COMMD4-213ENST00000565834 SEC62Q99442 399 aaKnown RBP22.56■■□□□ 1.2
COMMD4-213ENST00000565834 CHD4Q14839 1912 aa22.56■■□□□ 1.2
COMMD4-213ENST00000565834 UBE3CQ15386 1083 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 ZNF589Q86UQ0 364 aaPredicted RBP22.55■■□□□ 1.2
COMMD4-213ENST00000565834 LSG1Q9H089 658 aaKnown RBP22.55■■□□□ 1.2
COMMD4-213ENST00000565834 MAST2Q6P0Q8 1798 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 G3V3G9 751 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 ZGPATQ8N5A5 531 aaKnown RBP22.55■■□□□ 1.2
COMMD4-213ENST00000565834 MAGEB6Q8N7X4 407 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 RAI14Q9P0K7 980 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 MAST3O60307 1309 aa22.55■■□□□ 1.2
COMMD4-213ENST00000565834 OSBP2Q969R2 916 aa22.54■■□□□ 1.2
COMMD4-213ENST00000565834 JAG2Q9Y219 1238 aa22.54■■□□□ 1.2
COMMD4-213ENST00000565834 CCDC171Q6TFL3 1326 aa22.54■■□□□ 1.2
COMMD4-213ENST00000565834 ZNF532Q9HCE3 1301 aa22.54■■□□□ 1.2
COMMD4-213ENST00000565834 SALL1Q9NSC2 1324 aa22.54■■□□□ 1.2
COMMD4-213ENST00000565834 ANP32AP39687 249 aaKnown RBP22.53■■□□□ 1.2
COMMD4-213ENST00000565834 SPTY2D1Q68D10 685 aaPredicted RBP22.53■■□□□ 1.2
COMMD4-213ENST00000565834 CCDC129Q6ZRS4 1044 aa22.53■■□□□ 1.2
COMMD4-213ENST00000565834 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
COMMD4-213ENST00000565834 PSMD1Q99460 953 aa22.53■■□□□ 1.2
COMMD4-213ENST00000565834 SRCAPQ6ZRS2 3230 aa22.53■■□□□ 1.2
COMMD4-213ENST00000565834 TCRBV5S4A2TA0A5A2 114 aa22.52■■□□□ 1.2
COMMD4-213ENST00000565834 M0R2C6 588 aa22.52■■□□□ 1.2
COMMD4-213ENST00000565834 MCCP23508 829 aa22.52■■□□□ 1.2
COMMD4-213ENST00000565834 DOK7Q18PE1 504 aa22.52■■□□□ 1.2
COMMD4-213ENST00000565834 PTH1RQ03431 593 aa22.52■■□□□ 1.2
COMMD4-213ENST00000565834 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
COMMD4-213ENST00000565834 FER1L6Q2WGJ9 1857 aa22.51■■□□□ 1.19
COMMD4-213ENST00000565834 KIAA2012Q0VF49 1180 aa22.51■■□□□ 1.19
COMMD4-213ENST00000565834 PUS7LQ9H0K6 701 aaKnown RBP22.51■■□□□ 1.19
COMMD4-213ENST00000565834 ARFGEF1Q9Y6D6 1849 aa22.51■■□□□ 1.19
COMMD4-213ENST00000565834 FAM205AQ6ZU69 1335 aa22.5■■□□□ 1.19
COMMD4-213ENST00000565834 IGSF3O75054 1194 aa22.5■■□□□ 1.19
COMMD4-213ENST00000565834 AOC3Q16853 763 aa22.5■■□□□ 1.19
COMMD4-213ENST00000565834 TBC1D22AQ8WUA7 517 aa22.5■■□□□ 1.19
COMMD4-213ENST00000565834 PPIP5K2O43314 1243 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 PRDX5P30044 214 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 PODNQ7Z5L7 613 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 DBNDD1Q9H9R9 158 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 LDHBP07195 334 aaKnown RBP22.49■■□□□ 1.19
COMMD4-213ENST00000565834 CYP7A1P22680 504 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 GTF2IP78347 998 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 NAA16Q6N069 864 aaPredicted RBP22.49■■□□□ 1.19
COMMD4-213ENST00000565834 TMED8Q6PL24 325 aaPredicted RBP22.49■■□□□ 1.19
COMMD4-213ENST00000565834 MAP4K1Q92918 833 aa22.49■■□□□ 1.19
COMMD4-213ENST00000565834 GPAA1O43292 621 aa22.48■■□□□ 1.19
COMMD4-213ENST00000565834 MECOMQ03112 1051 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms