RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 TLL2Q9Y6L7 1015 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 CACNA1SQ13698 1873 aa11.07□□□□□ -0.64
CDH13-207ENST00000565636 CAMTA2O94983 1202 aa11.07□□□□□ -0.64
CDH13-207ENST00000565636 INSM1Q01101 510 aaPredicted RBP11.07□□□□□ -0.64
CDH13-207ENST00000565636 CC2D2BQ6DHV5 1058 aa11.07□□□□□ -0.64
CDH13-207ENST00000565636 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
CDH13-207ENST00000565636 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDH13-207ENST00000565636 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
CDH13-207ENST00000565636 C21orf2O43822 256 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 NPR1P16066 1061 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 PRELPP51888 382 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 RASSF7Q02833 373 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 NNTQ13423 1086 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 CC2D1BQ5T0F9 858 aaKnown RBP11.06□□□□□ -0.64
CDH13-207ENST00000565636 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
CDH13-207ENST00000565636 PNISRQ8TF01 805 aaKnown RBP11.06□□□□□ -0.64
CDH13-207ENST00000565636 C7orf43Q8WVR3 580 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 RTF1Q92541 710 aaKnown RBP11.06□□□□□ -0.64
CDH13-207ENST00000565636 NUP98P52948 1817 aa11.06□□□□□ -0.64
CDH13-207ENST00000565636 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
CDH13-207ENST00000565636 BMP1P13497 986 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 COL11A2P13942 1736 aaPredicted RBP11.05□□□□□ -0.64
CDH13-207ENST00000565636 SCARF1Q14162 830 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 PNMA8AQ86V59 439 aaPredicted RBP11.05□□□□□ -0.64
CDH13-207ENST00000565636 BPHLQ86WA6 291 aaPredicted RBP11.05□□□□□ -0.64
CDH13-207ENST00000565636 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
CDH13-207ENST00000565636 MAP10Q9P2G4 905 aa11.05□□□□□ -0.64
CDH13-207ENST00000565636 NPHP1O15259 732 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 WIPF1O43516 503 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 ADH1CP00326 375 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
CDH13-207ENST00000565636 A1BGP04217 495 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
CDH13-207ENST00000565636 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 COL13A1Q5TAT6 717 aaPredicted RBP11.04□□□□□ -0.64
CDH13-207ENST00000565636 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
CDH13-207ENST00000565636 LDHDQ86WU2 507 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 NBPF5PQ86XG9 351 aaPredicted RBP11.04□□□□□ -0.64
CDH13-207ENST00000565636 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 USP16Q9Y5T5 823 aa11.04□□□□□ -0.64
CDH13-207ENST00000565636 FKBP4Q02790 459 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDH13-207ENST00000565636 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
CDH13-207ENST00000565636 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
CDH13-207ENST00000565636 PHACTR3Q96KR7 559 aa11.03□□□□□ -0.64
CDH13-207ENST00000565636 PSMD1Q99460 953 aa11.03□□□□□ -0.64
CDH13-207ENST00000565636 DLG5Q8TDM6 1919 aa11.03□□□□□ -0.64
CDH13-207ENST00000565636 RIC1Q4ADV7 1423 aa11.02□□□□□ -0.64
CDH13-207ENST00000565636 NEFMP07197 916 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.65
CDH13-207ENST00000565636 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 PRDM10Q9NQV6 1147 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
CDH13-207ENST00000565636 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
CDH13-207ENST00000565636 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 FZD9O00144 591 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 HOXA10P31260 410 aaPredicted RBP11.01□□□□□ -0.65
CDH13-207ENST00000565636 NR5A1Q13285 461 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 CRY2Q49AN0 593 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 GPC2Q8N158 579 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 CDK15Q96Q40 435 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 TAF1DQ9H5J8 278 aaPredicted RBP11.01□□□□□ -0.65
CDH13-207ENST00000565636 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 STK17AQ9UEE5 414 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 LIMD1Q9UGP4 676 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 ERBB4Q15303 1308 aa11.01□□□□□ -0.65
CDH13-207ENST00000565636 IBTKQ9P2D0 1353 aaPredicted RBP11.01□□□□□ -0.65
CDH13-207ENST00000565636 TRPM7Q96QT4 1865 aa11□□□□□ -0.65
CDH13-207ENST00000565636 LILRB3O75022 631 aa11□□□□□ -0.65
CDH13-207ENST00000565636 DDNO94850 711 aaPredicted RBP11□□□□□ -0.65
CDH13-207ENST00000565636 HSPA1AP0DMV8 641 aaKnown RBP11□□□□□ -0.65
CDH13-207ENST00000565636 HSPA1BP0DMV9 641 aaKnown RBP11□□□□□ -0.65
CDH13-207ENST00000565636 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
CDH13-207ENST00000565636 HTRA3P83110 453 aa11□□□□□ -0.65
CDH13-207ENST00000565636 FOXJ1Q92949 421 aa11□□□□□ -0.65
CDH13-207ENST00000565636 ADAMTSL1Q8N6G6 1762 aa11□□□□□ -0.65
CDH13-207ENST00000565636 TMEM88BA6NKF7 163 aa10.99□□□□□ -0.65
CDH13-207ENST00000565636 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
CDH13-207ENST00000565636 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDH13-207ENST00000565636 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
CDH13-207ENST00000565636 JDP2Q8WYK2 163 aa10.99□□□□□ -0.65
CDH13-207ENST00000565636 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
CDH13-207ENST00000565636 HACL1Q9UJ83 578 aa10.99□□□□□ -0.65
CDH13-207ENST00000565636 NIP7Q9Y221 180 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDH13-207ENST00000565636 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
CDH13-207ENST00000565636 CNTNAP1P78357 1384 aa10.99□□□□□ -0.65
CDH13-207ENST00000565636 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
CDH13-207ENST00000565636 KCNQ3O43525 872 aa10.98□□□□□ -0.65
CDH13-207ENST00000565636 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
CDH13-207ENST00000565636 PPP2R1AP30153 589 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms