RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 EDC3Q96F86 508 aaKnown RBP11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 HIBADHP31937 336 aaKnown RBP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 GPSM2P81274 684 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 SCARF1Q14162 830 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 USP26Q9BXU7 913 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 SNRKQ9NRH2 765 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 KIF13BQ9NQT8 1826 aa11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 PDS5AQ29RF7 1337 aaKnown RBP11.27□□□□□ -0.61
CNEP1R1-206ENST00000565556 MYH7P12883 1935 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 GYG1P46976 350 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 CCDC173Q0VFZ6 552 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 RASGRF1Q13972 1273 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 RABEP1Q15276 862 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 HMG20BQ9P0W2 317 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 CACNA1SQ13698 1873 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 UFL1O94874 794 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 ZNF804AQ7Z570 1209 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
CNEP1R1-206ENST00000565556 MYH13Q9UKX3 1938 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 IRS2Q9Y4H2 1338 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 MCCP23508 829 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 PI16Q6UXB8 463 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 MPNDQ8N594 471 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 TBC1D16Q8TBP0 767 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 LTBP1Q14766 1721 aa11.25□□□□□ -0.61
CNEP1R1-206ENST00000565556 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 RRP9O43818 475 aaKnown RBP11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 IGSF3O75054 1194 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 CHRNA5P30532 468 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 TGFB2P61812 414 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 MAP3K12Q12852 859 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 GAS2L3Q86XJ1 694 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 FAM227BQ96M60 508 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 SLX4Q8IY92 1834 aa11.24□□□□□ -0.61
CNEP1R1-206ENST00000565556 A0A0D9SFI3 127 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 NUCB2P80303 420 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 PIH1D3Q9NQM4 214 aaKnown RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 IDH1O75874 414 aaKnown RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 BAG4O95429 457 aaKnown RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 TPM2P07951 284 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 KLRK1P26718 216 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 EYA3Q99504 573 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
CNEP1R1-206ENST00000565556 MYO5AQ9Y4I1 1855 aaKnown RBP11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 ADD2P35612 726 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 SLC9C2Q5TAH2 1124 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 TXNRD3Q86VQ6 643 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 ZGPATQ8N5A5 531 aaKnown RBP11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 TDRD7Q8NHU6 1098 aaKnown RBP11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 APPBP2Q92624 585 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 ZC3H12CQ9C0D7 883 aaKnown RBP11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 IL25Q9H293 177 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 IQSEC3Q9UPP2 1182 aaPredicted RBP11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 CCDC171Q6TFL3 1326 aa11.22□□□□□ -0.61
CNEP1R1-206ENST00000565556 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 IL1R1P14778 569 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 DPEP1P16444 411 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 ANAPC15P60006 121 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms