RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SYNJ2O15056 1496 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 DBN1Q16643 649 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 DENND2CQ68D51 928 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 PFDN4Q9NQP4 134 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 ORC3Q9UBD5 711 aaPredicted RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 TYRO3Q06418 890 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 NCBP1Q09161 790 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 TAF7Q15545 349 aaPredicted RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 TRIM4Q9C037 500 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 USP16Q9Y5T5 823 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 GSTO1P78417 241 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 SULT6B1Q6IMI4 303 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 C8orf74Q6P047 294 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 CCDC25Q86WR0 208 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 MICAL1Q8TDZ2 1067 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 ZC3H15Q8WU90 426 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 NSD2O96028 1365 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 TDRD9Q8NDG6 1382 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 GEN1Q17RS7 908 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 CABP2Q9NPB3 220 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 PFDN1O60925 122 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 HLA-DOAP06340 250 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 MAIP1Q8WWC4 291 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 INTS4Q96HW7 963 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 FRMD4BQ9Y2L6 1034 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 ITSN2Q9NZM3 1697 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 B4DLN1 442 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 BAG3O95817 575 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 XRCC6P12956 609 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMG1-211ENST00000565324 EEF2P13639 858 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 MRPL12P52815 198 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 RPAINQ86UA6 219 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 PDCD7Q8N8D1 485 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 RBM42Q9BTD8 480 aaKnown RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 EXOC6BQ9Y2D4 811 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 LRRD1A4D1F6 860 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 RNF40O75150 1001 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 LDHCP07864 332 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 VSIG1Q86XK7 387 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 TRIM75PA6NK02 468 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 MICU3Q86XE3 530 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 MMRN2Q9H8L6 949 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 EPRSP07814 1512 aaKnown RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 TLDC2A0PJX2 215 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 CCDC122Q5T0U0 273 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 CYP26C1Q6V0L0 522 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 C6orf50Q9HD87 102 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 ECHDC1Q9NTX5 307 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 NCAPD3P42695 1498 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 AKR1B15C9JRZ8 316 aaPredicted RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 ZNF354CQ86Y25 554 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 ZGPATQ8N5A5 531 aaKnown RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 RAB17Q9H0T7 212 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 ARHGAP4P98171 946 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 CRNKL1Q9BZJ0 848 aaKnown RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 RARSP54136 660 aaKnown RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 SDCCAG3Q96C92 435 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 ANKIB1Q9P2G1 1089 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 IL16Q14005 1332 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 SPTLC2O15270 562 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 MYL6BP14649 208 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 RPL13P26373 211 aaKnown RBP5.7□□□□□ -1.5
SMG1-211ENST00000565324 CCDC65Q8IXS2 484 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 SAMM50Q9Y512 469 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 ORC6Q9Y5N6 252 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 ZNF569Q5MCW4 686 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 AGTPBP1Q9UPW5 1226 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 CFAP221Q4G0U5 840 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 NEK1Q96PY6 1258 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 KIF14Q15058 1648 aa5.7□□□□□ -1.5
SMG1-211ENST00000565324 RNF8O76064 485 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 KRT3P12035 628 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 MYL5Q02045 173 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 ANKRD20A3Q5VUR7 823 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 NOX5Q96PH1 765 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 DEUP1Q05D60 604 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 P3H4Q92791 437 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 CCDC124Q96CT7 223 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 NUP58Q9BVL2 599 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 FAF1Q9UNN5 650 aaPredicted RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 STK24Q9Y6E0 443 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 RTL9Q8NET4 1388 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 ZNF131P52739 623 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 SLC8A3P57103 927 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 LIN9Q5TKA1 542 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 IL1RAPL2Q9NP60 686 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 EPS15L1Q9UBC2 864 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 EIF2AK4Q9P2K8 1649 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 SLMAPQ14BN4 828 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 HHATQ5VTY9 493 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 SYCE1Q8N0S2 351 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 CCDC68Q9H2F9 335 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 TYW1Q9NV66 732 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 TFIP11Q9UBB9 837 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 ZC3H6P61129 1189 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 LMNB2Q03252 620 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms