RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 MAK16Q9BXY0 300 aaKnown RBP7.18□□□□□ -1.26
PTPN9-204ENST00000564970 KIF9Q9HAQ2 790 aa7.18□□□□□ -1.26
PTPN9-204ENST00000564970 KLC4Q9NSK0 619 aa7.18□□□□□ -1.26
PTPN9-204ENST00000564970 SPATA7Q9P0W8 599 aa7.18□□□□□ -1.26
PTPN9-204ENST00000564970 VPS18Q9P253 973 aa7.18□□□□□ -1.26
PTPN9-204ENST00000564970 MAGEC2Q9UBF1 373 aaPredicted RBP7.18□□□□□ -1.26
PTPN9-204ENST00000564970 DDX25Q9UHL0 483 aaKnown RBP7.18□□□□□ -1.26
PTPN9-204ENST00000564970 RAB21Q9UL25 225 aa7.18□□□□□ -1.26
PTPN9-204ENST00000564970 EXOC6BQ9Y2D4 811 aa7.18□□□□□ -1.26
PTPN9-204ENST00000564970 HMMRO75330 724 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 MYL1P05976 194 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 ZNF24P17028 368 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 CNGA1P29973 690 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 NLRP5P59047 1200 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 NAA25Q14CX7 972 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 LONRF2Q1L5Z9 754 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 USH1GQ495M9 461 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 SMYD1Q8NB12 490 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 CNNM3Q8NE01 707 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 SPDYE1Q8NFV5 336 aaPredicted RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 PPP2R3CQ969Q6 453 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 SPDL1Q96EA4 605 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC85AQ96PX6 553 aaPredicted RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 IRX2Q9BZI1 471 aaPredicted RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 TRIM5Q9C035 493 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 TRIM4Q9C037 500 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 OSBPL5Q9H0X9 879 aaPredicted RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 MMADHCQ9H3L0 296 aaPredicted RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 HOOK1Q9UJC3 728 aaKnown RBP7.17□□□□□ -1.26
PTPN9-204ENST00000564970 TMCO1Q9UM00 188 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 ZDHHC9Q9Y397 364 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 DAAM1Q9Y4D1 1078 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 PCDHB15Q9Y5E8 787 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 EVC2Q86UK5 1308 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 SHANK2Q9UPX8 1470 aa7.17□□□□□ -1.26
PTPN9-204ENST00000564970 ITSN2Q9NZM3 1697 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 PER1O15534 1290 aaPredicted RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 MEFVO15553 781 aaPredicted RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 ZSCAN12O43309 604 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 CBFA2T2O43439 604 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 RASSF9O75901 435 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 TPPPO94811 219 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 ECEL1O95672 775 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 NAT1P18440 290 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 ATP5JP18859 108 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 FNTAP49354 379 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 AMPHP49418 695 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 LIG3P49916 1009 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 GNAI1P63096 354 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 NAA30Q147X3 362 aaPredicted RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 MAP3K11Q16584 847 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 SOGA3Q5TF21 947 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 INTS3Q68E01 1043 aaKnown RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 RSRC2Q7L4I2 434 aaKnown RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 LCA5Q86VQ0 697 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 CEP57Q86XR8 500 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 LRRC49Q8IUZ0 686 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC65Q8IXS2 484 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 SPC24Q8NBT2 197 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 PARD3BQ8TEW8 1205 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 LMBR1Q8WVP7 490 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 TBC1D5Q92609 795 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 RUBCNQ92622 972 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 RBM41Q96IZ5 413 aaKnown RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 TSGA10Q9BZW7 698 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 DDX19AQ9NUU7 478 aaKnown RBP7.16□□□□□ -1.26
PTPN9-204ENST00000564970 COG6Q9Y2V7 657 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 TMEM98Q9Y2Y6 226 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 LTBP4Q8N2S1 1624 aa7.16□□□□□ -1.26
PTPN9-204ENST00000564970 PRC1O43663 620 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 KRT38O76015 456 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 VIMP08670 466 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC159P0C7I6 412 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 RPL13P26373 211 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 COPB2P35606 906 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CCT6AP40227 531 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 EVCP57679 992 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 AKAP17AQ02040 695 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC15Q0P6D6 951 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 PPFIA1Q13136 1202 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 RIPK1Q13546 671 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CLPPQ16740 277 aaPredicted RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 LONRF3Q496Y0 759 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC40Q4G0X9 1142 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 VPS53Q5VIR6 699 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 RBM43Q6ZSC3 357 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 GET4Q7L5D6 327 aaPredicted RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 LRRC43Q8N309 656 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 MSANTD4Q8NCY6 345 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 KCNV2Q8TDN2 545 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 CUL5Q93034 780 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 FAM81BQ96LP2 452 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 JAKMIP1Q96N16 626 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 SCLT1Q96NL6 688 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 FMNL2Q96PY5 1086 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 SPAG5Q96R06 1193 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 GORASP1Q9BQQ3 440 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms