RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 A0A1B0GUL7 405 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 SLC3A2P08195 630 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 ITGA6P23229 1130 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 IL6STP40189 918 aaPredicted RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 DYNLL1P63167 89 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 ST3GAL1Q11201 340 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 ANKRD1Q15327 319 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 SUSD4Q5VX71 490 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 LDHAL6AQ6ZMR3 332 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 ANKARQ7Z5J8 1434 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 MINDY4BA8MYZ0 360 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 ERC2O15083 957 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 GTF2E1P29083 439 aaPredicted RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 DZIP3Q86Y13 1208 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 WDR78Q5VTH9 848 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 RBM8AQ9Y5S9 174 aaKnown RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 UBN2Q6ZU65 1347 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 TAF1P21675 1872 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 VEGFAP15692 232 aaPredicted RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 MCM4P33991 863 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 GOLGA8FQ08AF8 430 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 GOLGA8DPQ0D2H9 430 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 WWC2Q6AWC2 1192 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 ARHGAP45Q92619 1136 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 GCC1Q96CN9 775 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 PHKA1P46020 1223 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 CACNB3P54284 484 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 BMP2KLQ5H9B9 411 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 USP37Q86T82 979 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 TMEM63CQ9P1W3 806 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 JCADQ9P266 1359 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 ZNF189O75820 626 aaPredicted RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 GRIK5Q16478 980 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 ERFEQ4G0M1 354 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 TEX2Q8IWB9 1127 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 STAMQ92783 540 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 ARMT1Q9H993 441 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 BIN1O00499 593 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 CASP1P29466 404 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 FERMT1Q9BQL6 677 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 FAM13BQ9NYF5 915 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 CHMP5Q9NZZ3 219 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 RAB11FIP3O75154 756 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 IL2RBP14784 551 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 MARCH10Q8NA82 808 aaPredicted RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 SPATA31A3Q5VYP0 1347 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 FOXO4P98177 505 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 CT47A1Q5JQC4 288 aaPredicted RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 STOX1Q6ZVD7 989 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 ADGRA1Q86SQ6 560 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 CLASRPQ8N2M8 674 aaKnown RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 NIP7Q9Y221 180 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-213ENST00000564845 KSR2Q6VAB6 950 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 SAP30BPQ9UHR5 308 aaKnown RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 KIF2AO00139 706 aaPredicted RBP3.92□□□□□ -1.78
CHD9-213ENST00000564845 FOXP2O15409 715 aa3.92□□□□□ -1.78
CHD9-213ENST00000564845 ERC1Q8IUD2 1116 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 BRF1Q92994 677 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 GJA10Q969M2 543 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 EXOC5O00471 708 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 GBP2P32456 591 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 SNAP25P60880 206 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 SART3Q15020 963 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 USPL1Q5W0Q7 1092 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 LAMA1P25391 3075 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 METTL24Q5JXM2 366 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 SLC30A10Q6XR72 485 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 KCNH5Q8NCM2 988 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 DDX60Q8IY21 1712 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 TUBBP07437 444 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 CDC25AP30304 524 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 HSPA1LP34931 641 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 CRKLP46109 303 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 CCT4P50991 539 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 DDB1Q16531 1140 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 Q6ZUG5 572 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 USP48Q86UV5 1035 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 OSBP2Q969R2 916 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 RBSNQ9H1K0 784 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 TACC3Q9Y6A5 838 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 GNPATO15228 680 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 BAG4O95429 457 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 IFIT1P09914 478 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 DGKZQ13574 1117 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 PLIN2Q99541 437 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 TSPYL1Q9H0U9 437 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 OSBPL3Q9H4L5 887 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 STK24Q9Y6E0 443 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 TTC21AQ8NDW8 1320 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 SNRPA1P09661 255 aaKnown RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 USP5P45974 858 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 FAM47AQ5JRC9 791 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 TBC1D9BQ66K14 1250 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 DCHS1Q96JQ0 3298 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 HINFPQ9BQA5 517 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 IRS4O14654 1257 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 CYP21A2P08686 494 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 ZKSCAN1P17029 563 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 PAX3P23760 479 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 NKX1-1Q15270 411 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms