RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 APAF1O14727 1248 aa13.73□□□□□ -0.21
CFDP1-203ENST00000564286 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
CFDP1-203ENST00000564286 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
CFDP1-203ENST00000564286 FBXO46Q6PJ61 603 aaPredicted RBP13.73□□□□□ -0.21
CFDP1-203ENST00000564286 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
CFDP1-203ENST00000564286 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
CFDP1-203ENST00000564286 TNRC18O15417 2968 aaPredicted RBP13.73□□□□□ -0.21
CFDP1-203ENST00000564286 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
CFDP1-203ENST00000564286 AKAP11Q9UKA4 1901 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 PI4KAP2A4QPH2 592 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 FKTNO75072 461 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 SASH1O94885 1247 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
CFDP1-203ENST00000564286 KCNJ4P48050 445 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 PRKG1Q13976 671 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 PI4KAP1Q8N8J0 262 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 MXD3Q9BW11 206 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 GREM2Q9H772 168 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
CFDP1-203ENST00000564286 SCN9AQ15858 1988 aa13.71□□□□□ -0.21
CFDP1-203ENST00000564286 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.21
CFDP1-203ENST00000564286 INHBEP58166 350 aa13.71□□□□□ -0.21
CFDP1-203ENST00000564286 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
CFDP1-203ENST00000564286 KIAA0825Q8IV33 1275 aa13.71□□□□□ -0.21
CFDP1-203ENST00000564286 ZNF804BA4D1E1 1349 aa13.7□□□□□ -0.22
CFDP1-203ENST00000564286 IGKV5-2P06315 115 aa13.7□□□□□ -0.22
CFDP1-203ENST00000564286 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
CFDP1-203ENST00000564286 SLC10A4Q96EP9 437 aa13.7□□□□□ -0.22
CFDP1-203ENST00000564286 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
CFDP1-203ENST00000564286 MANSC4A6NHS7 340 aaPredicted RBP13.69□□□□□ -0.22
CFDP1-203ENST00000564286 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
CFDP1-203ENST00000564286 C7P10643 843 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 GTF2IP78347 998 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 DLGAP5Q15398 846 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
CFDP1-203ENST00000564286 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 UBE3BQ7Z3V4 1068 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 CFHR5Q9BXR6 569 aa13.69□□□□□ -0.22
CFDP1-203ENST00000564286 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
CFDP1-203ENST00000564286 H7C1W4 665 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 MYO1BO43795 1136 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 ITGA6P23229 1130 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 LDLRAD1Q5T700 205 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 TXNRD3Q86VQ6 643 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 DEFB129Q9H1M3 183 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 MYH16Q9H6N6 1097 aa13.68□□□□□ -0.22
CFDP1-203ENST00000564286 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
CFDP1-203ENST00000564286 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
CFDP1-203ENST00000564286 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
CFDP1-203ENST00000564286 PPP2R3BQ9Y5P8 575 aa13.67□□□□□ -0.22
CFDP1-203ENST00000564286 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
CFDP1-203ENST00000564286 ZBTB48P10074 688 aaPredicted RBP13.66□□□□□ -0.22
CFDP1-203ENST00000564286 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
CFDP1-203ENST00000564286 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
CFDP1-203ENST00000564286 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
CFDP1-203ENST00000564286 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
CFDP1-203ENST00000564286 UNCXA6NJT0 531 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 CHRNDQ07001 517 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 GCKRQ14397 625 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
CFDP1-203ENST00000564286 ZNF804AQ7Z570 1209 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
CFDP1-203ENST00000564286 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 R3HDMLQ9H3Y0 253 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 CD209Q9NNX6 404 aa13.65□□□□□ -0.22
CFDP1-203ENST00000564286 CSF1RP07333 972 aa13.64□□□□□ -0.23
CFDP1-203ENST00000564286 KLRK1P26718 216 aa13.64□□□□□ -0.23
CFDP1-203ENST00000564286 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
CFDP1-203ENST00000564286 RBM5P52756 815 aaKnown RBP eCLIP13.64□□□□□ -0.23
CFDP1-203ENST00000564286 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
CFDP1-203ENST00000564286 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
CFDP1-203ENST00000564286 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
CFDP1-203ENST00000564286 ZBED3Q96IU2 234 aaPredicted RBP13.64□□□□□ -0.23
CFDP1-203ENST00000564286 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
CFDP1-203ENST00000564286 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
CFDP1-203ENST00000564286 PSME4Q14997 1843 aa13.64□□□□□ -0.23
CFDP1-203ENST00000564286 F8W031 263 aaPredicted RBP13.63□□□□□ -0.23
CFDP1-203ENST00000564286 FKBP5Q13451 457 aaPredicted RBP13.63□□□□□ -0.23
CFDP1-203ENST00000564286 MAP3K11Q16584 847 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 OTOP1Q7RTM1 612 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 WNK4Q96J92 1243 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 VEZTQ9HBM0 779 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
CFDP1-203ENST00000564286 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
CFDP1-203ENST00000564286 FLIIQ13045 1269 aa13.62□□□□□ -0.23
CFDP1-203ENST00000564286 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
CFDP1-203ENST00000564286 G2E3Q7L622 706 aa13.62□□□□□ -0.23
CFDP1-203ENST00000564286 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
CFDP1-203ENST00000564286 CLMNQ96JQ2 1002 aa13.62□□□□□ -0.23
CFDP1-203ENST00000564286 PDE4DIPQ5VU43 2346 aa13.61□□□□□ -0.23
CFDP1-203ENST00000564286 TAF5LO75529 589 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms