RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 DDX19BQ9UMR2 479 aa25.18■■□□□ 1.62
CMTM3-206ENST00000563672 C20orf194Q5TEA3 1177 aa25.17■■□□□ 1.62
CMTM3-206ENST00000563672 OGFOD1Q8N543 542 aa25.17■■□□□ 1.62
CMTM3-206ENST00000563672 KIAA0825Q8IV33 1275 aa25.16■■□□□ 1.62
CMTM3-206ENST00000563672 DNAJC5GQ8N7S2 189 aa25.16■■□□□ 1.62
CMTM3-206ENST00000563672 JAG2Q9Y219 1238 aa25.16■■□□□ 1.62
CMTM3-206ENST00000563672 TFCP2Q12800 502 aa25.15■■□□□ 1.62
CMTM3-206ENST00000563672 CEP85Q6P2H3 762 aa25.15■■□□□ 1.62
CMTM3-206ENST00000563672 ZBTB40Q9NUA8 1239 aa25.15■■□□□ 1.62
CMTM3-206ENST00000563672 TRAF5O00463 557 aa25.14■■□□□ 1.62
CMTM3-206ENST00000563672 FMR1Q06787 632 aaKnown RBP eCLIP25.14■■□□□ 1.62
CMTM3-206ENST00000563672 G3BP1Q13283 466 aaKnown RBP eCLIP25.14■■□□□ 1.62
CMTM3-206ENST00000563672 SCARF1Q14162 830 aa25.14■■□□□ 1.62
CMTM3-206ENST00000563672 CDC37L1Q7L3B6 337 aa25.14■■□□□ 1.62
CMTM3-206ENST00000563672 GLIS2Q9BZE0 524 aaPredicted RBP25.14■■□□□ 1.62
CMTM3-206ENST00000563672 CREBZFQ9NS37 354 aa25.14■■□□□ 1.62
CMTM3-206ENST00000563672 IQSEC3Q9UPP2 1182 aaPredicted RBP25.14■■□□□ 1.62
CMTM3-206ENST00000563672 HDAC9Q9UKV0 1011 aa25.13■■□□□ 1.61
CMTM3-206ENST00000563672 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.13■■□□□ 1.61
CMTM3-206ENST00000563672 ASTN2O75129 1339 aaPredicted RBP25.12■■□□□ 1.61
CMTM3-206ENST00000563672 MFSD14BQ5SR56 506 aa25.12■■□□□ 1.61
CMTM3-206ENST00000563672 CHMP4BQ9H444 224 aaKnown RBP25.12■■□□□ 1.61
CMTM3-206ENST00000563672 AKAP2Q9Y2D5 859 aa25.12■■□□□ 1.61
CMTM3-206ENST00000563672 NOP58Q9Y2X3 529 aaKnown RBP25.12■■□□□ 1.61
CMTM3-206ENST00000563672 TMEM88BA6NKF7 163 aa25.11■■□□□ 1.61
CMTM3-206ENST00000563672 FRAT2O75474 233 aaPredicted RBP25.11■■□□□ 1.61
CMTM3-206ENST00000563672 TIMM10P62072 90 aa25.11■■□□□ 1.61
CMTM3-206ENST00000563672 USP48Q86UV5 1035 aa25.11■■□□□ 1.61
CMTM3-206ENST00000563672 DCPSQ96C86 337 aaKnown RBP25.11■■□□□ 1.61
CMTM3-206ENST00000563672 ZBED3Q96IU2 234 aaPredicted RBP25.11■■□□□ 1.61
CMTM3-206ENST00000563672 GGA3Q9NZ52 723 aa25.11■■□□□ 1.61
CMTM3-206ENST00000563672 WNT10BO00744 389 aa25.1■■□□□ 1.61
CMTM3-206ENST00000563672 ZBTB22O15209 634 aa25.1■■□□□ 1.61
CMTM3-206ENST00000563672 ADORA1P30542 326 aa25.1■■□□□ 1.61
CMTM3-206ENST00000563672 NBPF9Q3BBW0 867 aa25.1■■□□□ 1.61
CMTM3-206ENST00000563672 A0A1B0GUL7 405 aa25.09■■□□□ 1.61
CMTM3-206ENST00000563672 SURF6O75683 361 aaKnown RBP25.09■■□□□ 1.61
CMTM3-206ENST00000563672 CHAF1AQ13111 956 aaPredicted RBP25.09■■□□□ 1.61
CMTM3-206ENST00000563672 ANGEL2Q5VTE6 544 aaKnown RBP25.09■■□□□ 1.61
CMTM3-206ENST00000563672 CST9Q5W186 159 aa25.09■■□□□ 1.61
CMTM3-206ENST00000563672 KRT26Q7Z3Y9 468 aa25.09■■□□□ 1.61
CMTM3-206ENST00000563672 MTMR14Q8NCE2 650 aa25.09■■□□□ 1.61
CMTM3-206ENST00000563672 TBC1D22AQ8WUA7 517 aa25.09■■□□□ 1.61
CMTM3-206ENST00000563672 F8W031 263 aaPredicted RBP25.08■■□□□ 1.61
CMTM3-206ENST00000563672 RPAP2Q8IXW5 612 aaPredicted RBP25.08■■□□□ 1.61
CMTM3-206ENST00000563672 GNL3LQ9NVN8 582 aaKnown RBP25.08■■□□□ 1.61
CMTM3-206ENST00000563672 PITPNM2Q9BZ72 1349 aa25.08■■□□□ 1.6
CMTM3-206ENST00000563672 PHKA1P46020 1223 aa25.07■■□□□ 1.6
CMTM3-206ENST00000563672 CCDC102BQ68D86 513 aa25.07■■□□□ 1.6
CMTM3-206ENST00000563672 DLK2Q6UY11 383 aa25.07■■□□□ 1.6
CMTM3-206ENST00000563672 XAGE2Q96GT9 111 aa25.07■■□□□ 1.6
CMTM3-206ENST00000563672 GPR108Q9NPR9 543 aa25.07■■□□□ 1.6
CMTM3-206ENST00000563672 ADM5C9JUS6 153 aa25.06■■□□□ 1.6
CMTM3-206ENST00000563672 DLGAP5Q15398 846 aa25.06■■□□□ 1.6
CMTM3-206ENST00000563672 GRIK5Q16478 980 aa25.06■■□□□ 1.6
CMTM3-206ENST00000563672 SULF1Q8IWU6 871 aa25.06■■□□□ 1.6
CMTM3-206ENST00000563672 SIRT2Q8IXJ6 389 aa25.06■■□□□ 1.6
CMTM3-206ENST00000563672 KLRG1Q96E93 195 aa25.06■■□□□ 1.6
CMTM3-206ENST00000563672 SEMA3EO15041 775 aa25.05■■□□□ 1.6
CMTM3-206ENST00000563672 RRP1P56182 461 aaKnown RBP25.05■■□□□ 1.6
CMTM3-206ENST00000563672 OS9Q13438 667 aaPredicted RBP25.05■■□□□ 1.6
CMTM3-206ENST00000563672 CFAP100Q494V2 611 aa25.05■■□□□ 1.6
CMTM3-206ENST00000563672 WDR66Q8TBY9 1149 aa25.05■■□□□ 1.6
CMTM3-206ENST00000563672 TTF2Q9UNY4 1162 aaKnown RBP25.05■■□□□ 1.6
CMTM3-206ENST00000563672 CELF2O95319 508 aaKnown RBP25.04■■□□□ 1.6
CMTM3-206ENST00000563672 NEUROD6Q96NK8 337 aa25.04■■□□□ 1.6
CMTM3-206ENST00000563672 SERPINA10Q9UK55 444 aa25.04■■□□□ 1.6
CMTM3-206ENST00000563672 SUGT1Q9Y2Z0 365 aa25.04■■□□□ 1.6
CMTM3-206ENST00000563672 PCDHAC2Q9Y5I4 1007 aa25.04■■□□□ 1.6
CMTM3-206ENST00000563672 COL1A1P02452 1464 aaPredicted RBP25.03■■□□□ 1.6
CMTM3-206ENST00000563672 SPDYE2BA6NHP3 402 aa25.03■■□□□ 1.6
CMTM3-206ENST00000563672 SPDYE6P0CI01 402 aa25.03■■□□□ 1.6
CMTM3-206ENST00000563672 PRMT6Q96LA8 375 aaPredicted RBP25.03■■□□□ 1.6
CMTM3-206ENST00000563672 DENND2AQ9ULE3 1009 aa25.03■■□□□ 1.6
CMTM3-206ENST00000563672 TNNI3KQ59H18 835 aa25.02■■□□□ 1.6
CMTM3-206ENST00000563672 FPGT-TNNI3KV9GXZ4 949 aa25.02■■□□□ 1.6
CMTM3-206ENST00000563672 ARAP2Q8WZ64 1704 aa25.01■■□□□ 1.59
CMTM3-206ENST00000563672 HDLBPQ00341 1268 aaKnown RBP25.01■■□□□ 1.59
CMTM3-206ENST00000563672 MRIQ9BWK5 157 aa25.01■■□□□ 1.59
CMTM3-206ENST00000563672 EXOC6BQ9Y2D4 811 aa25.01■■□□□ 1.59
CMTM3-206ENST00000563672 POLR2AP24928 1970 aaKnown RBP25.01■■□□□ 1.59
CMTM3-206ENST00000563672 RASSF10A6NK89 507 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 HMMRO75330 724 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 RASGRF1Q13972 1273 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 ZNF408Q9H9D4 720 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 MKRN1Q9UHC7 482 aaKnown RBP25■■□□□ 1.59
CMTM3-206ENST00000563672 ABT1Q9ULW3 272 aaKnown RBP25■■□□□ 1.59
CMTM3-206ENST00000563672 TLL2Q9Y6L7 1015 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 PDS5AQ29RF7 1337 aaKnown RBP25■■□□□ 1.59
CMTM3-206ENST00000563672 SALL1Q9NSC2 1324 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 CNTNAP1P78357 1384 aa25■■□□□ 1.59
CMTM3-206ENST00000563672 CRKP46108 304 aa24.99■■□□□ 1.59
CMTM3-206ENST00000563672 RBM5P52756 815 aaKnown RBP eCLIP24.99■■□□□ 1.59
CMTM3-206ENST00000563672 ERC1Q8IUD2 1116 aa24.99■■□□□ 1.59
CMTM3-206ENST00000563672 CDCA5Q96FF9 252 aa24.99■■□□□ 1.59
CMTM3-206ENST00000563672 SCAF8Q9UPN6 1271 aaKnown RBP24.99■■□□□ 1.59
CMTM3-206ENST00000563672 TRPM7Q96QT4 1865 aa24.98■■□□□ 1.59
CMTM3-206ENST00000563672 AOX1Q06278 1338 aa24.98■■□□□ 1.59
CMTM3-206ENST00000563672 HSP90AB4PQ58FF6 505 aa24.98■■□□□ 1.59
CMTM3-206ENST00000563672 GORABQ5T7V8 394 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms