RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ADD1P35611 737 aaKnown RBP13.7□□□□□ -0.22
ABCA3-203ENST00000563623 SLC52A2Q9HAB3 445 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 ZNF202O95125 648 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 TRDNQ13061 729 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 ARHGAP29Q52LW3 1261 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 NFXL1Q6ZNB6 911 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
ABCA3-203ENST00000563623 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
ABCA3-203ENST00000563623 PXDNQ92626 1479 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 KIF2AO00139 706 aaPredicted RBP13.69□□□□□ -0.22
ABCA3-203ENST00000563623 RNF113AO15541 343 aaKnown RBP13.69□□□□□ -0.22
ABCA3-203ENST00000563623 UBASH3AP57075 661 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 CARMIL3Q8ND23 1372 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 A0A1B0GUL7 405 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 SYCP1Q15431 976 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 OLFM4Q6UX06 510 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 KRT28Q7Z3Y7 464 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
ABCA3-203ENST00000563623 NALCNQ8IZF0 1738 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 ATP1A3P13637 1013 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
ABCA3-203ENST00000563623 FANCCQ00597 558 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 FMR1NBQ8N0W7 255 aaPredicted RBP13.68□□□□□ -0.22
ABCA3-203ENST00000563623 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 MAST3O60307 1309 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
ABCA3-203ENST00000563623 SYKP43405 635 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 GABPB1Q06547 395 aaPredicted RBP13.68□□□□□ -0.22
ABCA3-203ENST00000563623 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 PPP1R13BQ96KQ4 1090 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 UTP14AQ9BVJ6 771 aaKnown RBP13.68□□□□□ -0.22
ABCA3-203ENST00000563623 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
ABCA3-203ENST00000563623 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 M0R2C6 588 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 TAF3Q5VWG9 929 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 CCDC82Q8N4S0 544 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 AIFM3Q96NN9 605 aa13.68□□□□□ -0.22
ABCA3-203ENST00000563623 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
ABCA3-203ENST00000563623 TRIM29Q14134 588 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 IFNL2Q8IZJ0 200 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 UTYO14607 1347 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
ABCA3-203ENST00000563623 CCDC57Q2TAC2 916 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 MYSM1Q5VVJ2 828 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 ANKLE2Q86XL3 938 aa13.67□□□□□ -0.22
ABCA3-203ENST00000563623 ARGLU1Q9NWB6 273 aaPredicted RBP13.67□□□□□ -0.22
ABCA3-203ENST00000563623 ZNF213O14771 459 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 PFKFB1P16118 471 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 SPECC1Q5M775 1068 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ZMYM1Q5SVZ6 1142 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ANO1Q5XXA6 986 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 CPLX2Q6PUV4 134 aaKnown RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 TTLL7Q6ZT98 887 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 CREBRFQ8IUR6 639 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 CWC25Q9NXE8 425 aaPredicted RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 TMCO3Q6UWJ1 677 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 LRRN4CLQ8ND94 238 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ZNF274Q96GC6 653 aaPredicted RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 NLRP12P59046 1061 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 TEX35Q5T0J7 233 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
ABCA3-203ENST00000563623 MORC2Q9Y6X9 1032 aaPredicted RBP13.66□□□□□ -0.22
ABCA3-203ENST00000563623 CCDC66A2RUB6 948 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 A1BGP04217 495 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 EXOSC10Q01780 885 aaKnown RBP13.65□□□□□ -0.22
ABCA3-203ENST00000563623 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
ABCA3-203ENST00000563623 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
ABCA3-203ENST00000563623 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
ABCA3-203ENST00000563623 PNOCQ13519 176 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 PHKBQ93100 1093 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.65□□□□□ -0.22
ABCA3-203ENST00000563623 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms