RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 GALNT12Q8IXK2 581 aa6.58□□□□□ -1.36
HMGB1P33-201ENST00000563485 ARMC10Q8N2F6 343 aa6.58□□□□□ -1.36
HMGB1P33-201ENST00000563485 CEP41Q9BYV8 373 aa6.58□□□□□ -1.36
HMGB1P33-201ENST00000563485 A0A1W2PP55 124 aa6.57□□□□□ -1.36
HMGB1P33-201ENST00000563485 PDE4CQ08493 712 aa6.57□□□□□ -1.36
HMGB1P33-201ENST00000563485 FAM129BQ96TA1 746 aa6.57□□□□□ -1.36
HMGB1P33-201ENST00000563485 ESRRAP11474 423 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 FSTP19883 344 aa6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 ARL4DP49703 201 aa6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 ORC1Q13415 861 aa6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 CCER1Q8TC90 406 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 FAM46AQ96IP4 442 aaKnown RBP6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 RUSC1Q9BVN2 902 aa6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 RAXQ9Y2V3 346 aa6.56□□□□□ -1.36
HMGB1P33-201ENST00000563485 GPR182O15218 404 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 IGHA2P01877 340 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 PDE3BQ13370 1112 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 ARTNQ5T4W7 220 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 CCNJLQ8IV13 435 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 TCF12Q99081 682 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 LIN7BQ9HAP6 207 aa6.55□□□□□ -1.36
HMGB1P33-201ENST00000563485 SOWAHDA6NJG2 315 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 GRIA4P48058 902 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 PREPP48147 710 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 SPRED3Q2MJR0 410 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 UVSSAQ2YD98 709 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 USP26Q9BXU7 913 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 RNF208Q9H0X6 261 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 NPHS2Q9NP85 383 aa6.54□□□□□ -1.36
HMGB1P33-201ENST00000563485 A0A096LPE4 126 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 A0A1W2PPZ6 126 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 NEFLP07196 543 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 LRP8Q14114 963 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 ANKRD34AQ69YU3 496 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 TMC1Q8TDI8 760 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 MYRFLQ96LU7 910 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 NIF3L1Q9GZT8 377 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 STOML1Q9UBI4 398 aa6.53□□□□□ -1.36
HMGB1P33-201ENST00000563485 LOC100289279A0A1B0GTE1 492 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 DLGAP3O95886 979 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 GSTM4Q03013 218 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 PCDH1Q08174 1060 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 KIAA0319Q5VV43 1072 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 EHD4Q9H223 541 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 GNEQ9Y223 722 aaKnown RBP6.52□□□□□ -1.37
HMGB1P33-201ENST00000563485 HMX2A2RU54 273 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 MEGF11A6BM72 1044 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 EIF1AYO14602 144 aaKnown RBP6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 BRD1O95696 1058 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 IGLV1-40P01703 118 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 ZNF423Q2M1K9 1284 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 RBCK1Q9BYM8 510 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 CLEC4MQ9H2X3 399 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
HMGB1P33-201ENST00000563485 HYAL3O43820 417 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 BMP3P12645 472 aa6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 FAM20CQ8IXL6 584 aa6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 CCDC74AQ96AQ1 378 aa6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 DMRTB1Q96MA1 342 aa6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 NRSN2Q9GZP1 204 aa6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 BIN2Q9UBW5 565 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P33-201ENST00000563485 GSC2O15499 205 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 GAS2O43903 313 aaKnown RBP6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 CTSBP07858 339 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 NUTM2GQ5VZR2 741 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 BEND4Q6ZU67 534 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 DNAJC25Q9H1X3 360 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 KCNF1Q9H3M0 494 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 ZNF576Q9H609 170 aa6.49□□□□□ -1.37
HMGB1P33-201ENST00000563485 TIAF1O95411 115 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 NFIAQ12857 509 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 SGO2Q562F6 1265 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 TMC7Q7Z402 723 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 SLC51AQ86UW1 340 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 C12orf50Q8NA57 414 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 SMG8Q8ND04 991 aaKnown RBP6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 EPS8L3Q8TE67 593 aaKnown RBP6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 SUGCTQ9HAC7 445 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 CYP4F12Q9HCS2 524 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 DCTN4Q9UJW0 460 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
HMGB1P33-201ENST00000563485 GADD45BO75293 160 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 B3GALT4O96024 378 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 TGFB1P01137 390 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 DRD2P14416 443 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms