RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
LINC00254-201ENST00000563416 GATA4P43694 442 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 IKBKEQ14164 716 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 CCDC27Q2M243 656 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 ALG1LQ6GMV1 187 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 FBF1Q8TES7 1133 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 TCF12Q99081 682 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 SPOCK3Q9BQ16 436 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
LINC00254-201ENST00000563416 ITGB2P05107 769 aa8.58□□□□□ -1.04
LINC00254-201ENST00000563416 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
LINC00254-201ENST00000563416 FGD1P98174 961 aa8.58□□□□□ -1.04
LINC00254-201ENST00000563416 ADGRE1Q14246 886 aa8.58□□□□□ -1.04
LINC00254-201ENST00000563416 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
LINC00254-201ENST00000563416 METTL12A8MUP2 240 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 C19orf57Q0VDD7 668 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 MBTPS1Q14703 1052 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
LINC00254-201ENST00000563416 PRPF40BQ6NWY9 871 aaKnown RBP8.57□□□□□ -1.04
LINC00254-201ENST00000563416 VN1R5Q7Z5H4 357 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 GALNT11Q8NCW6 608 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
LINC00254-201ENST00000563416 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
LINC00254-201ENST00000563416 CLEC4MQ9H2X3 399 aaPredicted RBP8.57□□□□□ -1.04
LINC00254-201ENST00000563416 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
LINC00254-201ENST00000563416 GRIA4P48058 902 aa8.56□□□□□ -1.04
LINC00254-201ENST00000563416 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
LINC00254-201ENST00000563416 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
LINC00254-201ENST00000563416 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
LINC00254-201ENST00000563416 PROCP04070 461 aa8.55□□□□□ -1.04
LINC00254-201ENST00000563416 ESRRAP11474 423 aaPredicted RBP8.55□□□□□ -1.04
LINC00254-201ENST00000563416 ERCC3P19447 782 aa8.55□□□□□ -1.04
LINC00254-201ENST00000563416 ITPKAP23677 461 aa8.55□□□□□ -1.04
LINC00254-201ENST00000563416 PTPN12Q05209 780 aaKnown RBP8.55□□□□□ -1.04
LINC00254-201ENST00000563416 GRM2Q14416 872 aa8.55□□□□□ -1.04
LINC00254-201ENST00000563416 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC00254-201ENST00000563416 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
LINC00254-201ENST00000563416 KLHDC7BQ96G42 594 aa8.55□□□□□ -1.04
LINC00254-201ENST00000563416 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
LINC00254-201ENST00000563416 P4HBP07237 508 aaKnown RBP8.54□□□□□ -1.04
LINC00254-201ENST00000563416 PCDH1Q08174 1060 aa8.54□□□□□ -1.04
LINC00254-201ENST00000563416 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
LINC00254-201ENST00000563416 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
LINC00254-201ENST00000563416 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
LINC00254-201ENST00000563416 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
LINC00254-201ENST00000563416 SRCIN1Q9C0H9 1055 aa8.54□□□□□ -1.04
LINC00254-201ENST00000563416 AKTIPQ9H8T0 292 aa8.54□□□□□ -1.04
LINC00254-201ENST00000563416 ABCB6Q9NP58 842 aa8.54□□□□□ -1.04
LINC00254-201ENST00000563416 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 GIPC1O14908 333 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 LDHBP07195 334 aaKnown RBP8.53□□□□□ -1.04
LINC00254-201ENST00000563416 XRCC5P13010 732 aaKnown RBP8.53□□□□□ -1.04
LINC00254-201ENST00000563416 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
LINC00254-201ENST00000563416 WFDC12Q8WWY7 111 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 BCO2Q9BYV7 579 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 ZNF576Q9H609 170 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
LINC00254-201ENST00000563416 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
LINC00254-201ENST00000563416 NLRP12P59046 1061 aa8.52□□□□□ -1.05
LINC00254-201ENST00000563416 PI16Q6UXB8 463 aa8.52□□□□□ -1.05
LINC00254-201ENST00000563416 DTHD1Q6ZMT9 781 aa8.52□□□□□ -1.05
LINC00254-201ENST00000563416 ACAD11Q709F0 780 aa8.52□□□□□ -1.05
LINC00254-201ENST00000563416 FRMD6Q96NE9 622 aa8.52□□□□□ -1.05
LINC00254-201ENST00000563416 TM4SF5O14894 197 aa8.51□□□□□ -1.05
LINC00254-201ENST00000563416 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
LINC00254-201ENST00000563416 FCGRTP55899 365 aa8.51□□□□□ -1.05
LINC00254-201ENST00000563416 GSTM4Q03013 218 aa8.51□□□□□ -1.05
LINC00254-201ENST00000563416 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
LINC00254-201ENST00000563416 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
LINC00254-201ENST00000563416 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.51□□□□□ -1.05
LINC00254-201ENST00000563416 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
LINC00254-201ENST00000563416 KCNK4Q9NYG8 393 aa8.51□□□□□ -1.05
LINC00254-201ENST00000563416 DDX3YO15523 660 aaKnown RBP8.5□□□□□ -1.05
LINC00254-201ENST00000563416 PRPF40AO75400 957 aaKnown RBP8.5□□□□□ -1.05
LINC00254-201ENST00000563416 B3GALT4O96024 378 aa8.5□□□□□ -1.05
LINC00254-201ENST00000563416 NOS3P29474 1203 aa8.5□□□□□ -1.05
LINC00254-201ENST00000563416 TMCO4Q5TGY1 634 aa8.5□□□□□ -1.05
LINC00254-201ENST00000563416 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
LINC00254-201ENST00000563416 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
LINC00254-201ENST00000563416 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
LINC00254-201ENST00000563416 ADAM11O75078 769 aa8.49□□□□□ -1.05
LINC00254-201ENST00000563416 GSTT1P30711 240 aa8.49□□□□□ -1.05
LINC00254-201ENST00000563416 ZNF423Q2M1K9 1284 aa8.49□□□□□ -1.05
LINC00254-201ENST00000563416 NPAS4Q8IUM7 802 aa8.49□□□□□ -1.05
LINC00254-201ENST00000563416 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
LINC00254-201ENST00000563416 CEP41Q9BYV8 373 aa8.49□□□□□ -1.05
LINC00254-201ENST00000563416 WISP1O95388 367 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 CYP11A1P05108 521 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 GLB1P16278 677 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 DOC2BQ14184 412 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
LINC00254-201ENST00000563416 HGSNATQ68CP4 663 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 UBASH3BQ8TF42 649 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 USP26Q9BXU7 913 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 RNF208Q9H0X6 261 aa8.48□□□□□ -1.05
LINC00254-201ENST00000563416 ALX3O95076 343 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 PPP2R3AQ06190 1150 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 AGGF1Q8N302 714 aaeCLIP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms