RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HIBADHP31937 336 aaKnown RBP21.62■■□□□ 1.05
COMMD4-208ENST00000563220 PDGFDQ9GZP0 370 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-208ENST00000563220 RNF20Q5VTR2 975 aa21.61■■□□□ 1.05
COMMD4-208ENST00000563220 COL1A1P02452 1464 aaPredicted RBP21.61■■□□□ 1.05
COMMD4-208ENST00000563220 CPA1P15085 419 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 PDE6BP35913 854 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 MAP3K12Q12852 859 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 TSGA10IPQ3SY00 556 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 JAKMIP1Q96N16 626 aaKnown RBP21.6■■□□□ 1.05
COMMD4-208ENST00000563220 TM6SF1Q9BZW5 370 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 DENND2AQ9ULE3 1009 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 NSFL1CQ9UNZ2 370 aaKnown RBP21.6■■□□□ 1.05
COMMD4-208ENST00000563220 FOXP2O15409 715 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 CASTP20810 708 aaKnown RBP21.6■■□□□ 1.05
COMMD4-208ENST00000563220 MAGEB6Q8N7X4 407 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 TTC14Q96N46 770 aa21.6■■□□□ 1.05
COMMD4-208ENST00000563220 GPAA1O43292 621 aa21.59■■□□□ 1.05
COMMD4-208ENST00000563220 NPR1P16066 1061 aa21.59■■□□□ 1.05
COMMD4-208ENST00000563220 COL9A3Q14050 684 aaPredicted RBP21.59■■□□□ 1.05
COMMD4-208ENST00000563220 ZSWIM6Q9HCJ5 1215 aa21.59■■□□□ 1.05
COMMD4-208ENST00000563220 ANKRD31Q8N7Z5 1873 aa21.59■■□□□ 1.05
COMMD4-208ENST00000563220 SEMA3EO15041 775 aa21.58■■□□□ 1.05
COMMD4-208ENST00000563220 CYP21A2P08686 494 aa21.58■■□□□ 1.05
COMMD4-208ENST00000563220 GPR101Q96P66 508 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-208ENST00000563220 FOXD4L1Q9NU39 408 aa21.58■■□□□ 1.05
COMMD4-208ENST00000563220 LRP2BPQ9P2M1 347 aa21.58■■□□□ 1.05
COMMD4-208ENST00000563220 PPEF1O14829 653 aaPredicted RBP21.57■■□□□ 1.04
COMMD4-208ENST00000563220 MCM2P49736 904 aa21.57■■□□□ 1.04
COMMD4-208ENST00000563220 C15orf52Q6ZUT6 534 aaKnown RBP21.57■■□□□ 1.04
COMMD4-208ENST00000563220 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
COMMD4-208ENST00000563220 IL27Q8NEV9 243 aa21.57■■□□□ 1.04
COMMD4-208ENST00000563220 PODXL2Q9NZ53 605 aa21.57■■□□□ 1.04
COMMD4-208ENST00000563220 ABCF2Q9UG63 623 aa21.57■■□□□ 1.04
COMMD4-208ENST00000563220 MYO5AQ9Y4I1 1855 aaKnown RBP21.57■■□□□ 1.04
COMMD4-208ENST00000563220 RPAP1Q9BWH6 1393 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-208ENST00000563220 A0A0G2JLW4 131 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 FRAT2O75474 233 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-208ENST00000563220 ATP2B4P23634 1241 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 DDIT3P35638 169 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 MASTLQ96GX5 879 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 TMX3Q96JJ7 454 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 UFL1O94874 794 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 TTLL5Q6EMB2 1281 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 NOL8Q76FK4 1167 aaKnown RBP21.56■■□□□ 1.04
COMMD4-208ENST00000563220 RUFY3Q7L099 469 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 TMC4Q7Z404 712 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 POLLQ9UGP5 575 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 GGA1Q9UJY5 639 aa21.56■■□□□ 1.04
COMMD4-208ENST00000563220 ZBTB22O15209 634 aa21.55■■□□□ 1.04
COMMD4-208ENST00000563220 HSP90AA1P07900 732 aaKnown RBP21.55■■□□□ 1.04
COMMD4-208ENST00000563220 PSMA5P28066 241 aa21.55■■□□□ 1.04
COMMD4-208ENST00000563220 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
COMMD4-208ENST00000563220 NBR1Q14596 966 aa21.55■■□□□ 1.04
COMMD4-208ENST00000563220 ATP6V0A2Q9Y487 856 aa21.55■■□□□ 1.04
COMMD4-208ENST00000563220 CYP46A1Q9Y6A2 500 aa21.55■■□□□ 1.04
COMMD4-208ENST00000563220 FGAP02671 866 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 AK2P54819 239 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 STRBPQ96SI9 672 aaKnown RBP21.54■■□□□ 1.04
COMMD4-208ENST00000563220 PDRG1Q9NUG6 133 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 PDS5AQ29RF7 1337 aaKnown RBP21.54■■□□□ 1.04
COMMD4-208ENST00000563220 C2CD5Q86YS7 1000 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 CCDC125Q86Z20 511 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 RAI14Q9P0K7 980 aa21.54■■□□□ 1.04
COMMD4-208ENST00000563220 MYH7P12883 1935 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 CHAF1AQ13111 956 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-208ENST00000563220 KRT32Q14532 448 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 OLFM4Q6UX06 510 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 STOX1Q6ZVD7 989 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 ILDR1Q86SU0 546 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-208ENST00000563220 TDRD7Q8NHU6 1098 aaKnown RBP21.53■■□□□ 1.04
COMMD4-208ENST00000563220 ZNF622Q969S3 477 aaKnown RBP eCLIP21.53■■□□□ 1.04
COMMD4-208ENST00000563220 AIDAQ96BJ3 306 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 QSER1Q2KHR3 1735 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 DOCK2Q92608 1830 aa21.53■■□□□ 1.04
COMMD4-208ENST00000563220 LARP6Q9BRS8 491 aaKnown RBP21.52■■□□□ 1.04
COMMD4-208ENST00000563220 JAG2Q9Y219 1238 aa21.52■■□□□ 1.04
COMMD4-208ENST00000563220 MBD4O95243 580 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 CYP7A1P22680 504 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 BLOC1S2Q6QNY1 142 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 ADGRA1Q86SQ6 560 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 ZNF384Q8TF68 577 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 NEK1Q96PY6 1258 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 CTNNA3Q9UI47 895 aa21.52■■□□□ 1.03
COMMD4-208ENST00000563220 RPS6KB1P23443 525 aa21.51■■□□□ 1.03
COMMD4-208ENST00000563220 ZNF804AQ7Z570 1209 aa21.51■■□□□ 1.03
COMMD4-208ENST00000563220 ARMT1Q9H993 441 aa21.51■■□□□ 1.03
COMMD4-208ENST00000563220 CHMP5Q9NZZ3 219 aa21.51■■□□□ 1.03
COMMD4-208ENST00000563220 H0YIN7 160 aa21.5■■□□□ 1.03
COMMD4-208ENST00000563220 C6orf229H3BNL8 230 aa21.5■■□□□ 1.03
COMMD4-208ENST00000563220 CUL4AQ13619 759 aa21.5■■□□□ 1.03
COMMD4-208ENST00000563220 CD209Q9NNX6 404 aa21.5■■□□□ 1.03
COMMD4-208ENST00000563220 CHRNA5P30532 468 aa21.49■■□□□ 1.03
COMMD4-208ENST00000563220 LCORLQ8N3X6 602 aa21.49■■□□□ 1.03
COMMD4-208ENST00000563220 ZGPATQ8N5A5 531 aaKnown RBP21.49■■□□□ 1.03
COMMD4-208ENST00000563220 MIGA1Q8NAN2 632 aa21.49■■□□□ 1.03
COMMD4-208ENST00000563220 TCEANC2Q96MN5 208 aa21.49■■□□□ 1.03
COMMD4-208ENST00000563220 STYK1Q6J9G0 422 aa21.49■■□□□ 1.03
COMMD4-208ENST00000563220 LIMCH1Q9UPQ0 1083 aa21.49■■□□□ 1.03
COMMD4-208ENST00000563220 COL11A2P13942 1736 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1172.4 ms