RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
CLK3-207ENST00000562389 ERC1Q8IUD2 1116 aa20.64■□□□□ 0.89
CLK3-207ENST00000562389 EXOC6BQ9Y2D4 811 aa20.64■□□□□ 0.89
CLK3-207ENST00000562389 SUPT16HQ9Y5B9 1047 aaKnown RBP20.64■□□□□ 0.89
CLK3-207ENST00000562389 USP17L8P0C7I0 530 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 ADORA1P30542 326 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 TIMM10P62072 90 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 CHADLQ6NUI6 762 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 CERS5Q8N5B7 392 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 TRPM4Q8TD43 1214 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 XAGE2Q96GT9 111 aa20.63■□□□□ 0.89
CLK3-207ENST00000562389 FRAT2O75474 233 aaPredicted RBP20.62■□□□□ 0.89
CLK3-207ENST00000562389 TNNI3KQ59H18 835 aa20.62■□□□□ 0.89
CLK3-207ENST00000562389 GNL3LQ9NVN8 582 aaKnown RBP20.62■□□□□ 0.89
CLK3-207ENST00000562389 IQSEC3Q9UPP2 1182 aaPredicted RBP20.62■□□□□ 0.89
CLK3-207ENST00000562389 FPGT-TNNI3KV9GXZ4 949 aa20.62■□□□□ 0.89
CLK3-207ENST00000562389 COL1A1P02452 1464 aaPredicted RBP20.62■□□□□ 0.89
CLK3-207ENST00000562389 PHKA1P46020 1223 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 HIRAP54198 1017 aaPredicted RBP20.61■□□□□ 0.89
CLK3-207ENST00000562389 KIF4BQ2VIQ3 1234 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 MFSD14BQ5SR56 506 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 CCDC102BQ68D86 513 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 SAMD7Q7Z3H4 446 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 JAG2Q9Y219 1238 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
CLK3-207ENST00000562389 SEMA3EO15041 775 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 AAMPQ13685 434 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 TBC1D10BQ4KMP7 808 aaPredicted RBP20.6■□□□□ 0.89
CLK3-207ENST00000562389 KIAA0825Q8IV33 1275 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 OGFOD1Q8N543 542 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 ZC3H15Q8WU90 426 aaKnown RBP20.6■□□□□ 0.89
CLK3-207ENST00000562389 TBC1D22AQ8WUA7 517 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 MYOZ2Q9NPC6 264 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 HDAC9Q9UKV0 1011 aa20.6■□□□□ 0.89
CLK3-207ENST00000562389 RAB11FIP3O75154 756 aa20.59■□□□□ 0.89
CLK3-207ENST00000562389 EGFRP00533 1210 aa20.59■□□□□ 0.89
CLK3-207ENST00000562389 CHAF1AQ13111 956 aaPredicted RBP20.59■□□□□ 0.89
CLK3-207ENST00000562389 RHPN1Q8TCX5 695 aa20.59■□□□□ 0.89
CLK3-207ENST00000562389 PGAP2Q9UHJ9 254 aa20.59■□□□□ 0.89
CLK3-207ENST00000562389 KIF1BPQ96EK5 621 aa20.58■□□□□ 0.89
CLK3-207ENST00000562389 DENND2AQ9ULE3 1009 aa20.58■□□□□ 0.89
CLK3-207ENST00000562389 PCDHB15Q9Y5E8 787 aa20.58■□□□□ 0.89
CLK3-207ENST00000562389 ECM29Q5VYK3 1845 aa20.57■□□□□ 0.88
CLK3-207ENST00000562389 PDS5AQ29RF7 1337 aaKnown RBP20.57■□□□□ 0.88
CLK3-207ENST00000562389 RBM26Q5T8P6 1007 aaKnown RBP20.57■□□□□ 0.88
CLK3-207ENST00000562389 WDR66Q8TBY9 1149 aa20.57■□□□□ 0.88
CLK3-207ENST00000562389 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
CLK3-207ENST00000562389 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
CLK3-207ENST00000562389 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
CLK3-207ENST00000562389 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
CLK3-207ENST00000562389 EAF2Q96CJ1 260 aaPredicted RBP20.56■□□□□ 0.88
CLK3-207ENST00000562389 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
CLK3-207ENST00000562389 SUGT1Q9Y2Z0 365 aa20.56■□□□□ 0.88
CLK3-207ENST00000562389 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
CLK3-207ENST00000562389 F8W031 263 aaPredicted RBP20.55■□□□□ 0.88
CLK3-207ENST00000562389 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
CLK3-207ENST00000562389 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
CLK3-207ENST00000562389 POLR2AP24928 1970 aaKnown RBP20.55■□□□□ 0.88
CLK3-207ENST00000562389 ITGBL1O95965 494 aaPredicted RBP20.54■□□□□ 0.88
CLK3-207ENST00000562389 UQCRFS1P1P0C7P4 283 aa20.54■□□□□ 0.88
CLK3-207ENST00000562389 ZBED3Q96IU2 234 aaPredicted RBP20.54■□□□□ 0.88
CLK3-207ENST00000562389 DCTPP1Q9H773 170 aa20.54■□□□□ 0.88
CLK3-207ENST00000562389 IL1RAPL2Q9NP60 686 aa20.54■□□□□ 0.88
CLK3-207ENST00000562389 DBNLQ9UJU6 430 aaKnown RBP20.54■□□□□ 0.88
CLK3-207ENST00000562389 TTF2Q9UNY4 1162 aaKnown RBP20.54■□□□□ 0.88
CLK3-207ENST00000562389 AKAP11Q9UKA4 1901 aa20.54■□□□□ 0.88
CLK3-207ENST00000562389 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 APBB1O00213 710 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 WNT10BO00744 389 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 HSPA6P17066 643 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 SCARF1Q14162 830 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 AACSQ86V21 672 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 CLASRPQ8N2M8 674 aaKnown RBP20.53■□□□□ 0.88
CLK3-207ENST00000562389 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 CCDC8Q9H0W5 538 aaPredicted RBP20.53■□□□□ 0.88
CLK3-207ENST00000562389 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
CLK3-207ENST00000562389 TRPM7Q96QT4 1865 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 MAST3O60307 1309 aa20.53■□□□□ 0.88
CLK3-207ENST00000562389 GRIK5Q16478 980 aa20.52■□□□□ 0.88
CLK3-207ENST00000562389 TTC39AQ5SRH9 613 aa20.52■□□□□ 0.88
CLK3-207ENST00000562389 ZGPATQ8N5A5 531 aaKnown RBP20.52■□□□□ 0.88
CLK3-207ENST00000562389 ZNF512BQ96KM6 892 aaPredicted RBP20.52■□□□□ 0.88
CLK3-207ENST00000562389 GGA3Q9NZ52 723 aa20.52■□□□□ 0.88
CLK3-207ENST00000562389 SERPINA10Q9UK55 444 aa20.52■□□□□ 0.88
CLK3-207ENST00000562389 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
CLK3-207ENST00000562389 MCAMP43121 646 aa20.51■□□□□ 0.87
CLK3-207ENST00000562389 HDLBPQ00341 1268 aaKnown RBP20.51■□□□□ 0.87
CLK3-207ENST00000562389 DLGAP5Q15398 846 aa20.51■□□□□ 0.87
CLK3-207ENST00000562389 NBPF9Q3BBW0 867 aa20.51■□□□□ 0.87
CLK3-207ENST00000562389 CFAP100Q494V2 611 aa20.51■□□□□ 0.87
CLK3-207ENST00000562389 DCPSQ96C86 337 aaKnown RBP20.51■□□□□ 0.87
CLK3-207ENST00000562389 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
CLK3-207ENST00000562389 HMG20BQ9P0W2 317 aa20.51■□□□□ 0.87
CLK3-207ENST00000562389 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
CLK3-207ENST00000562389 APLP1P51693 650 aa20.5■□□□□ 0.87
CLK3-207ENST00000562389 HDAC1Q13547 482 aaPredicted RBP20.5■□□□□ 0.87
CLK3-207ENST00000562389 ANGEL2Q5VTE6 544 aaKnown RBP20.5■□□□□ 0.87
CLK3-207ENST00000562389 CDC37L1Q7L3B6 337 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms