RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 KIF2CQ99661 725 aa17.16■□□□□ 0.34
COMMD4-205ENST00000562310 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-205ENST00000562310 MTFR1LQ9H019 292 aa17.16■□□□□ 0.34
COMMD4-205ENST00000562310 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
COMMD4-205ENST00000562310 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
COMMD4-205ENST00000562310 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
COMMD4-205ENST00000562310 POLD1P28340 1107 aa17.15■□□□□ 0.34
COMMD4-205ENST00000562310 ADD2P35612 726 aa17.15■□□□□ 0.34
COMMD4-205ENST00000562310 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
COMMD4-205ENST00000562310 MAST3O60307 1309 aa17.15■□□□□ 0.34
COMMD4-205ENST00000562310 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-205ENST00000562310 PDE6AP16499 860 aa17.14■□□□□ 0.33
COMMD4-205ENST00000562310 KLRK1P26718 216 aa17.14■□□□□ 0.33
COMMD4-205ENST00000562310 RNF20Q5VTR2 975 aa17.14■□□□□ 0.33
COMMD4-205ENST00000562310 ZNF589Q86UQ0 364 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-205ENST00000562310 TBC1D16Q8TBP0 767 aa17.14■□□□□ 0.33
COMMD4-205ENST00000562310 MAP4K1Q92918 833 aa17.14■□□□□ 0.33
COMMD4-205ENST00000562310 SNX21Q969T3 373 aa17.14■□□□□ 0.33
COMMD4-205ENST00000562310 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-205ENST00000562310 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-205ENST00000562310 PTH1RQ03431 593 aa17.13■□□□□ 0.33
COMMD4-205ENST00000562310 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
COMMD4-205ENST00000562310 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
COMMD4-205ENST00000562310 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
COMMD4-205ENST00000562310 HSCBQ8IWL3 235 aa17.13■□□□□ 0.33
COMMD4-205ENST00000562310 MPNDQ8N594 471 aa17.13■□□□□ 0.33
COMMD4-205ENST00000562310 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
COMMD4-205ENST00000562310 DSCC1Q9BVC3 393 aa17.13■□□□□ 0.33
COMMD4-205ENST00000562310 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
COMMD4-205ENST00000562310 ZKSCAN1P17029 563 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-205ENST00000562310 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
COMMD4-205ENST00000562310 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-205ENST00000562310 TDRD7Q8NHU6 1098 aaKnown RBP17.12■□□□□ 0.33
COMMD4-205ENST00000562310 KCNB2Q92953 911 aa17.12■□□□□ 0.33
COMMD4-205ENST00000562310 LRP2BPQ9P2M1 347 aa17.12■□□□□ 0.33
COMMD4-205ENST00000562310 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
COMMD4-205ENST00000562310 TCRBV5S4A2TA0A5A2 114 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 M0R2C6 588 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 ST18O60284 1047 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 CHRNA5P30532 468 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 SPTY2D1Q68D10 685 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-205ENST00000562310 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
COMMD4-205ENST00000562310 EYA3Q99504 573 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 POLLQ9UGP5 575 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-205ENST00000562310 LAMA4Q16363 1823 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
COMMD4-205ENST00000562310 ZBTB7AO95365 584 aa17.1■□□□□ 0.33
COMMD4-205ENST00000562310 IL1R1P14778 569 aa17.1■□□□□ 0.33
COMMD4-205ENST00000562310 R3HDM1Q15032 1099 aaKnown RBP17.1■□□□□ 0.33
COMMD4-205ENST00000562310 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
COMMD4-205ENST00000562310 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
COMMD4-205ENST00000562310 PALD1Q9ULE6 856 aa17.1■□□□□ 0.33
COMMD4-205ENST00000562310 GPAA1O43292 621 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 CHGBP05060 677 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
COMMD4-205ENST00000562310 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
COMMD4-205ENST00000562310 SLC27A2O14975 620 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 TGFB2P61812 414 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-205ENST00000562310 KRT32Q14532 448 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 TTLL6Q8N841 843 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 TBC1D2Q9BYX2 928 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.32
COMMD4-205ENST00000562310 COA1Q9GZY4 146 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
COMMD4-205ENST00000562310 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.32
COMMD4-205ENST00000562310 SNED1Q8TER0 1413 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-205ENST00000562310 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
COMMD4-205ENST00000562310 GNAT2P19087 354 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 MCM2P49736 904 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 TBC1D22AQ8WUA7 517 aa17.07■□□□□ 0.32
COMMD4-205ENST00000562310 RTFDC1Q9BY42 306 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-205ENST00000562310 FAM205AQ6ZU69 1335 aa17.06■□□□□ 0.32
COMMD4-205ENST00000562310 PSMA5P28066 241 aa17.06■□□□□ 0.32
COMMD4-205ENST00000562310 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
COMMD4-205ENST00000562310 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-205ENST00000562310 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
COMMD4-205ENST00000562310 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-205ENST00000562310 CYP7A1P22680 504 aa17.05■□□□□ 0.32
COMMD4-205ENST00000562310 GSTO1P78417 241 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms