RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 SLKQ9H2G2 1235 aaPredicted RBP11.4□□□□□ -0.58
CDH13-205ENST00000562307 STK32BQ9NY57 414 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 DENND2AQ9ULE3 1009 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 XDHP47989 1333 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 FOXP2O15409 715 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 MMP10P09238 476 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
CDH13-205ENST00000562307 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 TMED8Q6PL24 325 aaPredicted RBP11.39□□□□□ -0.59
CDH13-205ENST00000562307 RUFY3Q7L099 469 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 TMX3Q96JJ7 454 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 JAKMIP1Q96N16 626 aaKnown RBP11.39□□□□□ -0.59
CDH13-205ENST00000562307 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
CDH13-205ENST00000562307 CWC22Q9HCG8 908 aaKnown RBP11.39□□□□□ -0.59
CDH13-205ENST00000562307 PODXL2Q9NZ53 605 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 CYP46A1Q9Y6A2 500 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
CDH13-205ENST00000562307 ZNF532Q9HCE3 1301 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 GPAA1O43292 621 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 IDH1O75874 414 aaKnown RBP11.38□□□□□ -0.59
CDH13-205ENST00000562307 CYP21A2P08686 494 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 SRGNP10124 158 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 CASTP20810 708 aaKnown RBP11.38□□□□□ -0.59
CDH13-205ENST00000562307 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 PDE6BP35913 854 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 BAG6P46379 1132 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 ALX1Q15699 326 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 INTS4Q96HW7 963 aaKnown RBP11.38□□□□□ -0.59
CDH13-205ENST00000562307 CTNNA3Q9UI47 895 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 WWC3Q9ULE0 1092 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
CDH13-205ENST00000562307 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 NPR1P16066 1061 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 RPS6KB1P23443 525 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 KLRK1P26718 216 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 AK2P54819 239 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 GPSM2P81274 684 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 VPS37DQ86XT2 251 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 SP8Q8IXZ3 490 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
CDH13-205ENST00000562307 PDRG1Q9NUG6 133 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 ANKIB1Q9P2G1 1089 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
CDH13-205ENST00000562307 FGAP02671 866 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
CDH13-205ENST00000562307 HMGB1P09429 215 aaKnown RBP11.36□□□□□ -0.59
CDH13-205ENST00000562307 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
CDH13-205ENST00000562307 BLOC1S2Q6QNY1 142 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 TXNRD3Q86VQ6 643 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 MAGEB6Q8N7X4 407 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 TDRD7Q8NHU6 1098 aaKnown RBP11.36□□□□□ -0.59
CDH13-205ENST00000562307 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
CDH13-205ENST00000562307 NEK1Q96PY6 1258 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
CDH13-205ENST00000562307 COL1A1P02452 1464 aaPredicted RBP11.36□□□□□ -0.59
CDH13-205ENST00000562307 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 MYH7P12883 1935 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
CDH13-205ENST00000562307 CPA1P15085 419 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 GNAT2P19087 354 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 ANKRD1Q15327 319 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 MASTLQ96GX5 879 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 LRP2BPQ9P2M1 347 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 GGA1Q9UJY5 639 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 IQSEC3Q9UPP2 1182 aaPredicted RBP11.35□□□□□ -0.59
CDH13-205ENST00000562307 ANKRD31Q8N7Z5 1873 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
CDH13-205ENST00000562307 E7EWF7 191 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
CDH13-205ENST00000562307 EXOSC10Q01780 885 aaKnown RBP11.34□□□□□ -0.59
CDH13-205ENST00000562307 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
CDH13-205ENST00000562307 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 NFKBIBQ15653 356 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 IMMTQ16891 758 aaKnown RBP11.34□□□□□ -0.59
CDH13-205ENST00000562307 TTLL5Q6EMB2 1281 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 ZNF804AQ7Z570 1209 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 FBXL16Q8N461 479 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 AIDAQ96BJ3 306 aa11.34□□□□□ -0.59
CDH13-205ENST00000562307 SH2B1Q9NRF2 756 aaPredicted RBP11.34□□□□□ -0.59
CDH13-205ENST00000562307 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
CDH13-205ENST00000562307 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 UFL1O94874 794 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 MBD4O95243 580 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 IL1R1P14778 569 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 CYP7A1P22680 504 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 NUCB2P80303 420 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 TOB2Q14106 344 aaPredicted RBP11.33□□□□□ -0.6
CDH13-205ENST00000562307 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
CDH13-205ENST00000562307 MSL1Q68DK7 614 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 STYK1Q6J9G0 422 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 DHX32Q7L7V1 743 aaKnown RBP11.33□□□□□ -0.6
CDH13-205ENST00000562307 DEFB132Q7Z7B7 95 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms