RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 ZDHHC9Q9Y397 364 aa19.76■□□□□ 0.75
PKD1-225ENST00000562297 COL1A1P02452 1464 aaPredicted RBP19.76■□□□□ 0.75
PKD1-225ENST00000562297 HMGB2P26583 209 aaKnown RBP19.75■□□□□ 0.75
PKD1-225ENST00000562297 ZNF827Q17R98 1081 aa19.75■□□□□ 0.75
PKD1-225ENST00000562297 ZNF532Q9HCE3 1301 aa19.75■□□□□ 0.75
PKD1-225ENST00000562297 APBA3O96018 575 aa19.75■□□□□ 0.75
PKD1-225ENST00000562297 GYG1P46976 350 aa19.75■□□□□ 0.75
PKD1-225ENST00000562297 AKT1S1Q96B36 256 aa19.75■□□□□ 0.75
PKD1-225ENST00000562297 NEK1Q96PY6 1258 aa19.75■□□□□ 0.75
PKD1-225ENST00000562297 NPHP1O15259 732 aa19.74■□□□□ 0.75
PKD1-225ENST00000562297 DDR1Q08345 913 aa19.74■□□□□ 0.75
PKD1-225ENST00000562297 FAM84BQ96KN1 310 aaPredicted RBP19.74■□□□□ 0.75
PKD1-225ENST00000562297 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
PKD1-225ENST00000562297 SERPINB2P05120 415 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 TOB2Q14106 344 aaPredicted RBP19.73■□□□□ 0.75
PKD1-225ENST00000562297 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 TTLL5Q6EMB2 1281 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
PKD1-225ENST00000562297 TPCN1Q9ULQ1 816 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 ME3Q16798 604 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 ANKRD2Q9GZV1 360 aa19.73■□□□□ 0.75
PKD1-225ENST00000562297 SH2B1Q9NRF2 756 aaPredicted RBP19.73■□□□□ 0.75
PKD1-225ENST00000562297 NRXN2Q9P2S2 1712 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 ANKRD31Q8N7Z5 1873 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 POLRMTO00411 1230 aaKnown RBP19.72■□□□□ 0.75
PKD1-225ENST00000562297 FGAP02671 866 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 KLRK1P26718 216 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 MAP3K12Q12852 859 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 GRAPQ13588 217 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 GRAPLQ8TC17 118 aaPredicted RBP19.72■□□□□ 0.75
PKD1-225ENST00000562297 CACNA1SQ13698 1873 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 IRS2Q9Y4H2 1338 aa19.72■□□□□ 0.75
PKD1-225ENST00000562297 FBXO33Q7Z6M2 555 aa19.71■□□□□ 0.75
PKD1-225ENST00000562297 GBP4Q96PP9 640 aa19.71■□□□□ 0.75
PKD1-225ENST00000562297 E7EWF7 191 aa19.71■□□□□ 0.75
PKD1-225ENST00000562297 ANKRD1Q15327 319 aa19.71■□□□□ 0.75
PKD1-225ENST00000562297 IQSEC3Q9UPP2 1182 aaPredicted RBP19.71■□□□□ 0.75
PKD1-225ENST00000562297 SLC51AQ86UW1 340 aa19.7■□□□□ 0.74
PKD1-225ENST00000562297 MAGEB6Q8N7X4 407 aa19.7■□□□□ 0.74
PKD1-225ENST00000562297 GNL3LQ9NVN8 582 aaKnown RBP19.7■□□□□ 0.74
PKD1-225ENST00000562297 TFCP2L1Q9NZI6 479 aa19.7■□□□□ 0.74
PKD1-225ENST00000562297 CTNNA3Q9UI47 895 aa19.7■□□□□ 0.74
PKD1-225ENST00000562297 ST5P78524 1137 aa19.69■□□□□ 0.74
PKD1-225ENST00000562297 CAVIN4Q5BKX8 364 aa19.69■□□□□ 0.74
PKD1-225ENST00000562297 POTEAQ6S8J7 498 aa19.69■□□□□ 0.74
PKD1-225ENST00000562297 COL23A1Q86Y22 540 aaPredicted RBP19.69■□□□□ 0.74
PKD1-225ENST00000562297 DDX11L8A8MPP1 907 aa19.69■□□□□ 0.74
PKD1-225ENST00000562297 BRD1O95696 1058 aa19.69■□□□□ 0.74
PKD1-225ENST00000562297 HMGB1P09429 215 aaKnown RBP19.69■□□□□ 0.74
PKD1-225ENST00000562297 STRBPQ96SI9 672 aaKnown RBP19.69■□□□□ 0.74
PKD1-225ENST00000562297 BAG4O95429 457 aaKnown RBP19.68■□□□□ 0.74
PKD1-225ENST00000562297 EXOSC10Q01780 885 aaKnown RBP19.68■□□□□ 0.74
PKD1-225ENST00000562297 DHX32Q7L7V1 743 aaKnown RBP19.68■□□□□ 0.74
PKD1-225ENST00000562297 CCDC83Q8IWF9 413 aa19.68■□□□□ 0.74
PKD1-225ENST00000562297 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.68■□□□□ 0.74
PKD1-225ENST00000562297 CHD4Q14839 1912 aa19.68■□□□□ 0.74
PKD1-225ENST00000562297 KLRG2A4D1S0 409 aaPredicted RBP19.68■□□□□ 0.74
PKD1-225ENST00000562297 GSE1Q14687 1217 aa19.68■□□□□ 0.74
PKD1-225ENST00000562297 SEMA3EO15041 775 aa19.67■□□□□ 0.74
PKD1-225ENST00000562297 ZBTB22O15209 634 aa19.67■□□□□ 0.74
PKD1-225ENST00000562297 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
PKD1-225ENST00000562297 AGXT2Q9BYV1 514 aa19.67■□□□□ 0.74
PKD1-225ENST00000562297 DENND2AQ9ULE3 1009 aa19.67■□□□□ 0.74
PKD1-225ENST00000562297 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
PKD1-225ENST00000562297 IMMTQ16891 758 aaKnown RBP19.66■□□□□ 0.74
PKD1-225ENST00000562297 Q6ZUG5 572 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 TXNRD3Q86VQ6 643 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 AIDAQ96BJ3 306 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 NBPF3Q9H094 633 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 LRRC37AA6NMS7 1700 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 HOXA10P31260 410 aaPredicted RBP19.66■□□□□ 0.74
PKD1-225ENST00000562297 HAND2P61296 217 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 RPGRQ92834 1020 aaKnown RBP19.66■□□□□ 0.74
PKD1-225ENST00000562297 LRP2BPQ9P2M1 347 aa19.66■□□□□ 0.74
PKD1-225ENST00000562297 MBD4O95243 580 aa19.65■□□□□ 0.74
PKD1-225ENST00000562297 HIBADHP31937 336 aaKnown RBP19.65■□□□□ 0.74
PKD1-225ENST00000562297 ZMYM6O95789 1325 aa19.65■□□□□ 0.74
PKD1-225ENST00000562297 TCHHQ07283 1943 aa19.65■□□□□ 0.74
PKD1-225ENST00000562297 ALX1Q15699 326 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 ADGRA1Q86SQ6 560 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 LRRC2Q9BYS8 371 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 LTBP1Q14766 1721 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 CCDC88AQ3V6T2 1871 aa19.64■□□□□ 0.74
PKD1-225ENST00000562297 PNPLA7Q6ZV29 1317 aa19.64■□□□□ 0.73
PKD1-225ENST00000562297 ZNF384Q8TF68 577 aa19.64■□□□□ 0.73
PKD1-225ENST00000562297 EPB41L4AQ9HCS5 686 aaPredicted RBP19.64■□□□□ 0.73
PKD1-225ENST00000562297 ABCF2Q9UG63 623 aa19.64■□□□□ 0.73
PKD1-225ENST00000562297 LEMD3Q9Y2U8 911 aa19.64■□□□□ 0.73
PKD1-225ENST00000562297 XDHP47989 1333 aa19.64■□□□□ 0.73
PKD1-225ENST00000562297 MAST2Q6P0Q8 1798 aa19.63■□□□□ 0.73
PKD1-225ENST00000562297 ZNF213O14771 459 aa19.63■□□□□ 0.73
PKD1-225ENST00000562297 FBXL16Q8N461 479 aa19.63■□□□□ 0.73
PKD1-225ENST00000562297 FLAD1Q8NFF5 587 aa19.63■□□□□ 0.73
PKD1-225ENST00000562297 ARMT1Q9H993 441 aa19.63■□□□□ 0.73
PKD1-225ENST00000562297 PATL2C9JE40 543 aaKnown RBP19.63■□□□□ 0.73
PKD1-225ENST00000562297 MB21D2Q8IYB1 491 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms