RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 SZT2Q5T011 3432 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 H7C1W4 665 aa14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 RBM5P52756 815 aaKnown RBP eCLIP14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 PKN2Q16513 984 aaKnown RBP14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 ZBED3Q96IU2 234 aaPredicted RBP14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 WNK4Q96J92 1243 aa14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 CD209Q9NNX6 404 aa14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 RBBP6Q7Z6E9 1792 aaKnown RBP14.97□□□□□ -0.01
NSMCE1-202ENST00000561960 F6X3S4 739 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 GCKRQ14397 625 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 CFAP100Q494V2 611 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 LDLRAD1Q5T700 205 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 OTOP1Q7RTM1 612 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 CNKSR2Q8WXI2 1034 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 ARAP2Q8WZ64 1704 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 PCDH10Q9P2E7 1040 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 CACNA1FO60840 1977 aa14.96□□□□□ -0.01
NSMCE1-202ENST00000561960 CASP7P55210 303 aa14.95□□□□□ -0.02
NSMCE1-202ENST00000561960 CRHR2Q13324 411 aa14.95□□□□□ -0.02
NSMCE1-202ENST00000561960 FKBP5Q13451 457 aaPredicted RBP14.95□□□□□ -0.02
NSMCE1-202ENST00000561960 PRMT6Q96LA8 375 aaPredicted RBP14.95□□□□□ -0.02
NSMCE1-202ENST00000561960 ELP3Q9H9T3 547 aa14.95□□□□□ -0.02
NSMCE1-202ENST00000561960 IRS2Q9Y4H2 1338 aa14.94□□□□□ -0.02
NSMCE1-202ENST00000561960 FLIIQ13045 1269 aa14.94□□□□□ -0.02
NSMCE1-202ENST00000561960 ANKRD2Q9GZV1 360 aa14.94□□□□□ -0.02
NSMCE1-202ENST00000561960 CEP290O15078 2479 aa14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 ANKRD18BA2A2Z9 1011 aa14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 EN2P19622 333 aaPredicted RBP14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 EPHA10Q5JZY3 1008 aa14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 PTPN18Q99952 460 aa14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 IQSEC3Q9UPP2 1182 aaPredicted RBP14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 AK9Q5TCS8 1911 aa14.93□□□□□ -0.02
NSMCE1-202ENST00000561960 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 MANSC4A6NHS7 340 aaPredicted RBP14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 FOXO4P98177 505 aa14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 DNAAF4Q8WXU2 420 aa14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
NSMCE1-202ENST00000561960 COL1A1P02452 1464 aaPredicted RBP14.91□□□□□ -0.02
NSMCE1-202ENST00000561960 TCP10L2B9ZVM9 353 aa14.91□□□□□ -0.02
NSMCE1-202ENST00000561960 CSF1RP07333 972 aa14.91□□□□□ -0.02
NSMCE1-202ENST00000561960 GYG1P46976 350 aa14.91□□□□□ -0.02
NSMCE1-202ENST00000561960 RASA3Q14644 834 aa14.91□□□□□ -0.02
NSMCE1-202ENST00000561960 TDRD3Q9H7E2 651 aaKnown RBP14.91□□□□□ -0.02
NSMCE1-202ENST00000561960 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 CACNB3P54284 484 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 GRIK5Q16478 980 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 LMBR1LQ6UX01 489 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 OPTNQ96CV9 577 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 PLA2G12BQ9BX93 195 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 PTPN22Q9Y2R2 807 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 FANCIQ9NVI1 1328 aa14.9□□□□□ -0.02
NSMCE1-202ENST00000561960 MYO1BO43795 1136 aa14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 HABP4Q5JVS0 413 aaKnown RBP14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 CFHR5Q9BXR6 569 aa14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 TMEM39BQ9GZU3 492 aa14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 MYH16Q9H6N6 1097 aa14.89□□□□□ -0.03
NSMCE1-202ENST00000561960 ALDH1A1P00352 501 aa14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 ZBTB48P10074 688 aaPredicted RBP14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 IREB2P48200 963 aaKnown RBP14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 LINS1Q8NG48 757 aa14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 ARHGAP39Q9C0H5 1083 aa14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 EFCC1Q9HA90 598 aa14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 CNNM1Q9NRU3 951 aa14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 ZNF70Q9UC06 446 aaPredicted RBP14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 TTF2Q9UNY4 1162 aaKnown RBP14.88□□□□□ -0.03
NSMCE1-202ENST00000561960 RANBP2P49792 3224 aaKnown RBP14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 IL1R1P14778 569 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 CHAF1AQ13111 956 aaPredicted RBP14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 MAP3K11Q16584 847 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 SUPT20HL1Q3ZLR7 823 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 MFSD14BQ5SR56 506 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 ERO1AQ96HE7 468 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 PTCH2Q9Y6C5 1203 aa14.87□□□□□ -0.03
NSMCE1-202ENST00000561960 SP3Q02447 781 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 VGLL4Q14135 290 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 SLC4A10Q6U841 1118 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 LDHAL6AQ6ZMR3 332 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 MTMR14Q8NCE2 650 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 SH3TC2Q8TF17 1288 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
NSMCE1-202ENST00000561960 TRIOBPQ9H2D6 2365 aa14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 CCL15-CCL14A0A0B4J2E2 113 aa14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 TAF1CQ15572 869 aaPredicted RBP14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 CCL15Q16663 113 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms