RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 FOCADQ5VW36 1801 aa15.41■□□□□ 0.06
CMTM4-203ENST00000561680 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
CMTM4-203ENST00000561680 PPIP5K2O43314 1243 aa15.41■□□□□ 0.06
CMTM4-203ENST00000561680 YBX3P16989 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
CMTM4-203ENST00000561680 SPATA5Q8NB90 893 aa15.41■□□□□ 0.06
CMTM4-203ENST00000561680 DNAJC2Q99543 621 aaKnown RBP15.41■□□□□ 0.06
CMTM4-203ENST00000561680 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
CMTM4-203ENST00000561680 DENND2AQ9ULE3 1009 aa15.41■□□□□ 0.06
CMTM4-203ENST00000561680 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
CMTM4-203ENST00000561680 NDUFB9Q9Y6M9 179 aa15.41■□□□□ 0.06
CMTM4-203ENST00000561680 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 SDSP20132 328 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
CMTM4-203ENST00000561680 ZAP70P43403 619 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 RASSF7Q02833 373 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 PAG1Q9NWQ8 432 aa15.4■□□□□ 0.06
CMTM4-203ENST00000561680 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
CMTM4-203ENST00000561680 ECE2O60344 883 aa15.39■□□□□ 0.05
CMTM4-203ENST00000561680 MAP4K4O95819 1239 aaPredicted RBP15.39■□□□□ 0.05
CMTM4-203ENST00000561680 EVI5LQ96CN4 794 aa15.39■□□□□ 0.05
CMTM4-203ENST00000561680 EDC3Q96F86 508 aaKnown RBP15.39■□□□□ 0.05
CMTM4-203ENST00000561680 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
CMTM4-203ENST00000561680 GOLIM4O00461 696 aa15.38■□□□□ 0.05
CMTM4-203ENST00000561680 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
CMTM4-203ENST00000561680 CYP2E1P05181 493 aaPredicted RBP15.38■□□□□ 0.05
CMTM4-203ENST00000561680 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
CMTM4-203ENST00000561680 PODNQ7Z5L7 613 aa15.38■□□□□ 0.05
CMTM4-203ENST00000561680 LARGE2Q8N3Y3 721 aa15.38■□□□□ 0.05
CMTM4-203ENST00000561680 ANTXR1Q9H6X2 564 aa15.38■□□□□ 0.05
CMTM4-203ENST00000561680 FAM205AQ6ZU69 1335 aa15.38■□□□□ 0.05
CMTM4-203ENST00000561680 G3V3G9 751 aa15.37■□□□□ 0.05
CMTM4-203ENST00000561680 PRELPP51888 382 aa15.37■□□□□ 0.05
CMTM4-203ENST00000561680 CHAF1AQ13111 956 aaPredicted RBP15.37■□□□□ 0.05
CMTM4-203ENST00000561680 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
CMTM4-203ENST00000561680 DCAF8Q5TAQ9 597 aa15.37■□□□□ 0.05
CMTM4-203ENST00000561680 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
CMTM4-203ENST00000561680 KBTBD3Q8NAB2 608 aa15.37■□□□□ 0.05
CMTM4-203ENST00000561680 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
CMTM4-203ENST00000561680 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
CMTM4-203ENST00000561680 YDJCA8MPS7 323 aa15.36■□□□□ 0.05
CMTM4-203ENST00000561680 ARHGAP27Q6ZUM4 889 aa15.36■□□□□ 0.05
CMTM4-203ENST00000561680 NIM1KQ8IY84 436 aa15.36■□□□□ 0.05
CMTM4-203ENST00000561680 WDR66Q8TBY9 1149 aa15.36■□□□□ 0.05
CMTM4-203ENST00000561680 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
CMTM4-203ENST00000561680 BAZ2AQ9UIF9 1905 aaKnown RBP15.35■□□□□ 0.05
CMTM4-203ENST00000561680 TICAM2Q86XR7 235 aa15.35■□□□□ 0.05
CMTM4-203ENST00000561680 FSD1Q9BTV5 496 aa15.35■□□□□ 0.05
CMTM4-203ENST00000561680 LAMA4Q16363 1823 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 NAV1Q8NEY1 1877 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 CDC45O75419 566 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 LMNB1P20700 586 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 GTF2IP78347 998 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 GPR162Q16538 588 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 TBC1D9Q6ZT07 1266 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
CMTM4-203ENST00000561680 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 MYH1P12882 1939 aa15.34■□□□□ 0.05
CMTM4-203ENST00000561680 FKBP1AP62942 108 aaKnown RBP15.33■□□□□ 0.04
CMTM4-203ENST00000561680 MFSD14BQ5SR56 506 aa15.33■□□□□ 0.04
CMTM4-203ENST00000561680 STRIP1Q5VSL9 837 aa15.33■□□□□ 0.04
CMTM4-203ENST00000561680 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
CMTM4-203ENST00000561680 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
CMTM4-203ENST00000561680 KCNQ5Q9NR82 932 aa15.33■□□□□ 0.04
CMTM4-203ENST00000561680 LAMB1P07942 1786 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 HIP1O00291 1037 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 IGSF3O75054 1194 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 IDH1O75874 414 aaKnown RBP15.32■□□□□ 0.04
CMTM4-203ENST00000561680 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 SPTY2D1Q68D10 685 aaPredicted RBP15.32■□□□□ 0.04
CMTM4-203ENST00000561680 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.04
CMTM4-203ENST00000561680 ABCF2Q9UG63 623 aa15.32■□□□□ 0.04
CMTM4-203ENST00000561680 FZD9O00144 591 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 ZFYP08048 801 aaPredicted RBP15.31■□□□□ 0.04
CMTM4-203ENST00000561680 CHMLP26374 656 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 PRDX5P30044 214 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 ADD2P35612 726 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 MAP3K12Q12852 859 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 LRRFIP1Q32MZ4 808 aaKnown RBP15.31■□□□□ 0.04
CMTM4-203ENST00000561680 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 CERS5Q8N5B7 392 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 LRP2BPQ9P2M1 347 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 SUGT1Q9Y2Z0 365 aa15.31■□□□□ 0.04
CMTM4-203ENST00000561680 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
CMTM4-203ENST00000561680 LDHBP07195 334 aaKnown RBP15.3■□□□□ 0.04
CMTM4-203ENST00000561680 MYH8P13535 1937 aa15.3■□□□□ 0.04
CMTM4-203ENST00000561680 PDE6AP16499 860 aa15.3■□□□□ 0.04
CMTM4-203ENST00000561680 POLR2AP24928 1970 aaKnown RBP15.3■□□□□ 0.04
CMTM4-203ENST00000561680 SCN4AP35499 1836 aa15.3■□□□□ 0.04
CMTM4-203ENST00000561680 GRIK5Q16478 980 aa15.3■□□□□ 0.04
CMTM4-203ENST00000561680 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms