RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 APBB1O00213 710 aa12.54□□□□□ -0.4
HERC1-212ENST00000561348 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
HERC1-212ENST00000561348 GRM1Q13255 1194 aa12.54□□□□□ -0.4
HERC1-212ENST00000561348 MVPQ14764 893 aaKnown RBP12.54□□□□□ -0.4
HERC1-212ENST00000561348 GORABQ5T7V8 394 aa12.54□□□□□ -0.4
HERC1-212ENST00000561348 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
HERC1-212ENST00000561348 USP48Q86UV5 1035 aa12.54□□□□□ -0.4
HERC1-212ENST00000561348 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
HERC1-212ENST00000561348 MYOZ2Q9NPC6 264 aa12.54□□□□□ -0.4
HERC1-212ENST00000561348 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
HERC1-212ENST00000561348 CIAO1O76071 339 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 SASH1O94885 1247 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 TIMM10P62072 90 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 SCARF1Q14162 830 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 DLK2Q6UY11 383 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
HERC1-212ENST00000561348 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 LPIN2Q92539 896 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
HERC1-212ENST00000561348 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
HERC1-212ENST00000561348 IL1R1P14778 569 aa12.52□□□□□ -0.41
HERC1-212ENST00000561348 ADORA1P30542 326 aa12.52□□□□□ -0.41
HERC1-212ENST00000561348 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.41
HERC1-212ENST00000561348 GGA3Q9NZ52 723 aa12.52□□□□□ -0.41
HERC1-212ENST00000561348 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
HERC1-212ENST00000561348 MKRN1Q9UHC7 482 aaKnown RBP12.52□□□□□ -0.41
HERC1-212ENST00000561348 ABT1Q9ULW3 272 aaKnown RBP12.52□□□□□ -0.41
HERC1-212ENST00000561348 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.41
HERC1-212ENST00000561348 ADM5C9JUS6 153 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
HERC1-212ENST00000561348 MTX1Q13505 466 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 ANGEL2Q5VTE6 544 aaKnown RBP12.51□□□□□ -0.41
HERC1-212ENST00000561348 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 SULF1Q8IWU6 871 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 CERS5Q8N5B7 392 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
HERC1-212ENST00000561348 GNL3LQ9NVN8 582 aaKnown RBP12.51□□□□□ -0.41
HERC1-212ENST00000561348 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 TTF2Q9UNY4 1162 aaKnown RBP12.51□□□□□ -0.41
HERC1-212ENST00000561348 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
HERC1-212ENST00000561348 A0A1B0GUL7 405 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 TMEM88BA6NKF7 163 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 CELF2O95319 508 aaKnown RBP12.5□□□□□ -0.41
HERC1-212ENST00000561348 FGFR2P21802 821 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
HERC1-212ENST00000561348 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
HERC1-212ENST00000561348 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 CEP85Q6P2H3 762 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 CDC37L1Q7L3B6 337 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 GMLQ99445 158 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 CHMP4BQ9H444 224 aaKnown RBP12.5□□□□□ -0.41
HERC1-212ENST00000561348 EXOC6BQ9Y2D4 811 aa12.5□□□□□ -0.41
HERC1-212ENST00000561348 PSME4Q14997 1843 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 PHKA1P46020 1223 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 ZC3H15Q8WU90 426 aaKnown RBP12.49□□□□□ -0.41
HERC1-212ENST00000561348 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 VEZTQ9HBM0 779 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 PCDHAC2Q9Y5I4 1007 aa12.49□□□□□ -0.41
HERC1-212ENST00000561348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.49□□□□□ -0.41
HERC1-212ENST00000561348 POLR2AP24928 1970 aaKnown RBP12.49□□□□□ -0.41
HERC1-212ENST00000561348 CLRN2A0PK11 232 aa12.48□□□□□ -0.41
HERC1-212ENST00000561348 RRP1P56182 461 aaKnown RBP12.48□□□□□ -0.41
HERC1-212ENST00000561348 POLA2Q14181 598 aa12.48□□□□□ -0.41
HERC1-212ENST00000561348 CFAP100Q494V2 611 aa12.48□□□□□ -0.41
HERC1-212ENST00000561348 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
HERC1-212ENST00000561348 FAM205AQ6ZU69 1335 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 WNT10BO00744 389 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 MYO1BO43795 1136 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 HMMRO75330 724 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 PRKG1Q13976 671 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 TTLL12Q14166 644 aaPredicted RBP12.47□□□□□ -0.41
HERC1-212ENST00000561348 GRIK5Q16478 980 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 TBC1D22AQ8WUA7 517 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 ABCF2Q9UG63 623 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 ADAMTSL1Q8N6G6 1762 aa12.47□□□□□ -0.41
HERC1-212ENST00000561348 TTC39AQ5SRH9 613 aa12.46□□□□□ -0.41
HERC1-212ENST00000561348 CCDC8Q9H0W5 538 aaPredicted RBP12.46□□□□□ -0.41
HERC1-212ENST00000561348 IL1RAPL2Q9NP60 686 aa12.46□□□□□ -0.41
HERC1-212ENST00000561348 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
HERC1-212ENST00000561348 MYH13Q9UKX3 1938 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 CRKP46108 304 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 CCDC158Q5M9N0 1113 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 CST9Q5W186 159 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
HERC1-212ENST00000561348 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 CDCA5Q96FF9 252 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 PRMT6Q96LA8 375 aaPredicted RBP12.45□□□□□ -0.42
HERC1-212ENST00000561348 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms