RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.36
TPM1-230ENST00000561266 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
TPM1-230ENST00000561266 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
TPM1-230ENST00000561266 LPIN2Q92539 896 aa17.27■□□□□ 0.36
TPM1-230ENST00000561266 PGAP2Q9UHJ9 254 aa17.27■□□□□ 0.36
TPM1-230ENST00000561266 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
TPM1-230ENST00000561266 FAM205AQ6ZU69 1335 aa17.26■□□□□ 0.35
TPM1-230ENST00000561266 CEP350Q5VT06 3117 aa17.26■□□□□ 0.35
TPM1-230ENST00000561266 TRAF5O00463 557 aa17.26■□□□□ 0.35
TPM1-230ENST00000561266 USP17L8P0C7I0 530 aa17.26■□□□□ 0.35
TPM1-230ENST00000561266 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
TPM1-230ENST00000561266 AOX1Q06278 1338 aa17.25■□□□□ 0.35
TPM1-230ENST00000561266 IFIT1P09914 478 aaKnown RBP17.25■□□□□ 0.35
TPM1-230ENST00000561266 SLC5A1P13866 664 aa17.25■□□□□ 0.35
TPM1-230ENST00000561266 PHKA1P46020 1223 aa17.25■□□□□ 0.35
TPM1-230ENST00000561266 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
TPM1-230ENST00000561266 GLIS2Q9BZE0 524 aaPredicted RBP17.25■□□□□ 0.35
TPM1-230ENST00000561266 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
TPM1-230ENST00000561266 NOP58Q9Y2X3 529 aaKnown RBP17.25■□□□□ 0.35
TPM1-230ENST00000561266 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
TPM1-230ENST00000561266 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
TPM1-230ENST00000561266 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
TPM1-230ENST00000561266 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
TPM1-230ENST00000561266 MYOZ2Q9NPC6 264 aa17.24■□□□□ 0.35
TPM1-230ENST00000561266 A0A1B0GUL7 405 aa17.23■□□□□ 0.35
TPM1-230ENST00000561266 CHAF1AQ13111 956 aaPredicted RBP17.23■□□□□ 0.35
TPM1-230ENST00000561266 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.35
TPM1-230ENST00000561266 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
TPM1-230ENST00000561266 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
TPM1-230ENST00000561266 ZBED3Q96IU2 234 aaPredicted RBP17.23■□□□□ 0.35
TPM1-230ENST00000561266 APLP1P51693 650 aa17.22■□□□□ 0.35
TPM1-230ENST00000561266 SCARF1Q14162 830 aa17.22■□□□□ 0.35
TPM1-230ENST00000561266 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
TPM1-230ENST00000561266 XAGE2Q96GT9 111 aa17.22■□□□□ 0.35
TPM1-230ENST00000561266 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
TPM1-230ENST00000561266 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.35
TPM1-230ENST00000561266 FKBP1AP62942 108 aaKnown RBP17.21■□□□□ 0.35
TPM1-230ENST00000561266 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
TPM1-230ENST00000561266 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
TPM1-230ENST00000561266 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
TPM1-230ENST00000561266 DNAJC5GQ8N7S2 189 aa17.21■□□□□ 0.35
TPM1-230ENST00000561266 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
TPM1-230ENST00000561266 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 ADM5C9JUS6 153 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 WNT10BO00744 389 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 CST9Q5W186 159 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
TPM1-230ENST00000561266 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
TPM1-230ENST00000561266 TNNI3KQ59H18 835 aa17.19■□□□□ 0.34
TPM1-230ENST00000561266 ANGEL2Q5VTE6 544 aaKnown RBP17.19■□□□□ 0.34
TPM1-230ENST00000561266 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
TPM1-230ENST00000561266 TLR7Q9NYK1 1049 aaKnown RBP17.19■□□□□ 0.34
TPM1-230ENST00000561266 FPGT-TNNI3KV9GXZ4 949 aa17.19■□□□□ 0.34
TPM1-230ENST00000561266 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
TPM1-230ENST00000561266 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
TPM1-230ENST00000561266 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
TPM1-230ENST00000561266 EAF2Q96CJ1 260 aaPredicted RBP17.18■□□□□ 0.34
TPM1-230ENST00000561266 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
TPM1-230ENST00000561266 DBNDD2Q9BQY9 259 aa17.18■□□□□ 0.34
TPM1-230ENST00000561266 AKAP2Q9Y2D5 859 aa17.18■□□□□ 0.34
TPM1-230ENST00000561266 PCDHB15Q9Y5E8 787 aa17.18■□□□□ 0.34
TPM1-230ENST00000561266 FRAT2O75474 233 aaPredicted RBP17.17■□□□□ 0.34
TPM1-230ENST00000561266 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
TPM1-230ENST00000561266 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
TPM1-230ENST00000561266 OGFOD1Q8N543 542 aa17.17■□□□□ 0.34
TPM1-230ENST00000561266 TTF2Q9UNY4 1162 aaKnown RBP17.17■□□□□ 0.34
TPM1-230ENST00000561266 PRAMEF18Q5VWM3 479 aa17.16■□□□□ 0.34
TPM1-230ENST00000561266 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
TPM1-230ENST00000561266 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
TPM1-230ENST00000561266 MTMR14Q8NCE2 650 aa17.16■□□□□ 0.34
TPM1-230ENST00000561266 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
TPM1-230ENST00000561266 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
TPM1-230ENST00000561266 APBB1O00213 710 aa17.15■□□□□ 0.34
TPM1-230ENST00000561266 PRDX5P30044 214 aa17.15■□□□□ 0.34
TPM1-230ENST00000561266 DCPSQ96C86 337 aaKnown RBP17.15■□□□□ 0.34
TPM1-230ENST00000561266 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
TPM1-230ENST00000561266 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
TPM1-230ENST00000561266 HMG20BQ9P0W2 317 aa17.15■□□□□ 0.34
TPM1-230ENST00000561266 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
TPM1-230ENST00000561266 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
TPM1-230ENST00000561266 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
TPM1-230ENST00000561266 MYH2Q9UKX2 1941 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 TMEM88BA6NKF7 163 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 ZBTB22O15209 634 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
TPM1-230ENST00000561266 MCAMP43121 646 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 CRKP46108 304 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 DLGAP5Q15398 846 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
TPM1-230ENST00000561266 CLRN2A0PK11 232 aa17.13■□□□□ 0.33
TPM1-230ENST00000561266 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
TPM1-230ENST00000561266 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
TPM1-230ENST00000561266 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
TPM1-230ENST00000561266 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
TPM1-230ENST00000561266 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
TPM1-230ENST00000561266 ZNF408Q9H9D4 720 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms