RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ZNF792Q3KQV3 632 aa8□□□□□ -1.13
USP8-216ENST00000561206 TTC39BQ5VTQ0 682 aaPredicted RBP8□□□□□ -1.13
USP8-216ENST00000561206 KSR1Q8IVT5 923 aa8□□□□□ -1.13
USP8-216ENST00000561206 C12orf50Q8NA57 414 aaPredicted RBP8□□□□□ -1.13
USP8-216ENST00000561206 BCL7CQ8WUZ0 217 aaPredicted RBP8□□□□□ -1.13
USP8-216ENST00000561206 TBC1D32Q96NH3 1257 aa8□□□□□ -1.13
USP8-216ENST00000561206 KRTAP9-8Q9BYQ0 159 aa8□□□□□ -1.13
USP8-216ENST00000561206 FAM13BQ9NYF5 915 aa8□□□□□ -1.13
USP8-216ENST00000561206 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
USP8-216ENST00000561206 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
USP8-216ENST00000561206 TFIP11Q9UBB9 837 aaKnown RBP7.99□□□□□ -1.13
USP8-216ENST00000561206 SLC5A6Q9Y289 635 aa7.99□□□□□ -1.13
USP8-216ENST00000561206 FAM170BA6NMN3 283 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 NFKBIEO00221 500 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 PRRG2O14669 202 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 ZNF865P0CJ78 1059 aaPredicted RBP7.98□□□□□ -1.13
USP8-216ENST00000561206 BRD2P25440 801 aaKnown RBP7.98□□□□□ -1.13
USP8-216ENST00000561206 MESP2Q0VG99 397 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 FBLIM1Q8WUP2 373 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 ABI2Q9NYB9 513 aaPredicted RBP7.98□□□□□ -1.13
USP8-216ENST00000561206 SOX13Q9UN79 622 aa7.98□□□□□ -1.13
USP8-216ENST00000561206 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
USP8-216ENST00000561206 CYP27A1Q02318 531 aa7.97□□□□□ -1.13
USP8-216ENST00000561206 C19orf57Q0VDD7 668 aa7.97□□□□□ -1.13
USP8-216ENST00000561206 PLCL1Q15111 1095 aa7.97□□□□□ -1.13
USP8-216ENST00000561206 STK11IPQ8N1F8 1099 aa7.97□□□□□ -1.13
USP8-216ENST00000561206 C2CD4AQ8NCU7 369 aaPredicted RBP7.97□□□□□ -1.13
USP8-216ENST00000561206 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 A6NJR5 290 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 CYP2E1P05181 493 aaPredicted RBP7.96□□□□□ -1.14
USP8-216ENST00000561206 ARL4DP49703 201 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 TMEM132AQ24JP5 1023 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 LILRA6Q6PI73 481 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 NCAPG2Q86XI2 1143 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 FAM168AQ92567 244 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 SLC38A3Q99624 504 aa7.96□□□□□ -1.14
USP8-216ENST00000561206 RAD21O60216 631 aa7.95□□□□□ -1.14
USP8-216ENST00000561206 USP11P51784 963 aa7.95□□□□□ -1.14
USP8-216ENST00000561206 FAM26DQ5JW98 314 aa7.95□□□□□ -1.14
USP8-216ENST00000561206 SPRED2Q7Z698 418 aa7.95□□□□□ -1.14
USP8-216ENST00000561206 FAM84AQ96KN4 292 aa7.95□□□□□ -1.14
USP8-216ENST00000561206 YIPF2Q9BWQ6 316 aa7.95□□□□□ -1.14
USP8-216ENST00000561206 FKBP5Q13451 457 aaPredicted RBP7.94□□□□□ -1.14
USP8-216ENST00000561206 HGSNATQ68CP4 663 aa7.94□□□□□ -1.14
USP8-216ENST00000561206 SLC7A3Q8WY07 619 aa7.94□□□□□ -1.14
USP8-216ENST00000561206 SALL4Q9UJQ4 1053 aa7.94□□□□□ -1.14
USP8-216ENST00000561206 DLGAP3O95886 979 aa7.93□□□□□ -1.14
USP8-216ENST00000561206 FUT4P22083 530 aa7.93□□□□□ -1.14
USP8-216ENST00000561206 EXOSC6Q5RKV6 272 aaKnown RBP7.93□□□□□ -1.14
USP8-216ENST00000561206 ZNF574Q6ZN55 896 aaPredicted RBP7.93□□□□□ -1.14
USP8-216ENST00000561206 MISP3Q96FF7 219 aa7.93□□□□□ -1.14
USP8-216ENST00000561206 SOX17Q9H6I2 414 aaPredicted RBP7.93□□□□□ -1.14
USP8-216ENST00000561206 DZANK1Q9NVP4 752 aa7.93□□□□□ -1.14
USP8-216ENST00000561206 RAPGEFL1Q9UHV5 662 aa7.93□□□□□ -1.14
USP8-216ENST00000561206 DRD2P14416 443 aa7.92□□□□□ -1.14
USP8-216ENST00000561206 SOX4Q06945 474 aaPredicted RBP7.92□□□□□ -1.14
USP8-216ENST00000561206 ZNF765Q7L2R6 523 aa7.92□□□□□ -1.14
USP8-216ENST00000561206 C1QL4Q86Z23 238 aa7.92□□□□□ -1.14
USP8-216ENST00000561206 PDE2AO00408 941 aaPredicted RBP7.91□□□□□ -1.14
USP8-216ENST00000561206 SOX1O00570 391 aaPredicted RBP7.91□□□□□ -1.14
USP8-216ENST00000561206 TNFRSF10BO14763 440 aa7.91□□□□□ -1.14
USP8-216ENST00000561206 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
USP8-216ENST00000561206 C16orf46Q6P387 395 aa7.91□□□□□ -1.14
USP8-216ENST00000561206 SIAH1Q8IUQ4 282 aa7.91□□□□□ -1.14
USP8-216ENST00000561206 SAP130Q9H0E3 1048 aa7.91□□□□□ -1.14
USP8-216ENST00000561206 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
USP8-216ENST00000561206 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
USP8-216ENST00000561206 B8ZZF3 427 aa7.89□□□□□ -1.15
USP8-216ENST00000561206 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
USP8-216ENST00000561206 CFPP27918 469 aa7.89□□□□□ -1.15
USP8-216ENST00000561206 MAP7Q14244 749 aa7.89□□□□□ -1.15
USP8-216ENST00000561206 RC3H2Q9HBD1 1191 aaKnown RBP7.89□□□□□ -1.15
USP8-216ENST00000561206 MBNL3Q9NUK0 354 aaKnown RBP7.89□□□□□ -1.15
USP8-216ENST00000561206 ZAP70P43403 619 aa7.88□□□□□ -1.15
USP8-216ENST00000561206 SEZ6L2Q6UXD5 910 aa7.88□□□□□ -1.15
USP8-216ENST00000561206 LCNL1Q6ZST4 164 aa7.88□□□□□ -1.15
USP8-216ENST00000561206 VN1R5Q7Z5H4 357 aa7.88□□□□□ -1.15
USP8-216ENST00000561206 TMEM102Q8N9M5 508 aaPredicted RBP7.88□□□□□ -1.15
USP8-216ENST00000561206 USP26Q9BXU7 913 aa7.88□□□□□ -1.15
USP8-216ENST00000561206 EIF4EBP3O60516 100 aaPredicted RBP7.87□□□□□ -1.15
USP8-216ENST00000561206 IKBKEQ14164 716 aa7.87□□□□□ -1.15
USP8-216ENST00000561206 BSNDQ8WZ55 320 aa7.87□□□□□ -1.15
USP8-216ENST00000561206 PPP1R12CQ9BZL4 782 aa7.87□□□□□ -1.15
USP8-216ENST00000561206 NRSN2Q9GZP1 204 aa7.87□□□□□ -1.15
USP8-216ENST00000561206 VRTNQ9H8Y1 702 aa7.87□□□□□ -1.15
USP8-216ENST00000561206 ELP3Q9H9T3 547 aa7.87□□□□□ -1.15
USP8-216ENST00000561206 TSPAN15O95858 294 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 ADH5P11766 374 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 ACPPP15309 386 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 TTLL10Q6ZVT0 673 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 GLMNQ92990 594 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 SEMA6CQ9H3T2 930 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 TMEM63CQ9P1W3 806 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 CNTN3Q9P232 1028 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 ADAMTS6Q9UKP5 1117 aa7.86□□□□□ -1.15
USP8-216ENST00000561206 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.86□□□□□ -1.15
USP8-216ENST00000561206 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms