RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DDIT3P35638 169 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 PDE6BP35913 854 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 GYG1P46976 350 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
HDDC3-206ENST00000561036 TTC14Q96N46 770 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 UPF3BQ9BZI7 483 aaKnown RBP20.47■□□□□ 0.87
HDDC3-206ENST00000561036 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 TCRBV5S4A2TA0A5A2 114 aa20.46■□□□□ 0.87
HDDC3-206ENST00000561036 HIBADHP31937 336 aaKnown RBP20.46■□□□□ 0.87
HDDC3-206ENST00000561036 TMED8Q6PL24 325 aaPredicted RBP20.46■□□□□ 0.87
HDDC3-206ENST00000561036 ALDH8A1Q9H2A2 487 aaPredicted RBP20.46■□□□□ 0.87
HDDC3-206ENST00000561036 ANKIB1Q9P2G1 1089 aa20.46■□□□□ 0.87
HDDC3-206ENST00000561036 IRS2Q9Y4H2 1338 aa20.46■□□□□ 0.87
HDDC3-206ENST00000561036 NPR1P16066 1061 aa20.45■□□□□ 0.86
HDDC3-206ENST00000561036 CASTP20810 708 aaKnown RBP20.45■□□□□ 0.86
HDDC3-206ENST00000561036 ATP2B4P23634 1241 aa20.45■□□□□ 0.86
HDDC3-206ENST00000561036 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
HDDC3-206ENST00000561036 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
HDDC3-206ENST00000561036 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
HDDC3-206ENST00000561036 ZNF532Q9HCE3 1301 aa20.45■□□□□ 0.86
HDDC3-206ENST00000561036 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
HDDC3-206ENST00000561036 ILDR1Q86SU0 546 aaPredicted RBP20.44■□□□□ 0.86
HDDC3-206ENST00000561036 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
HDDC3-206ENST00000561036 PUS7LQ9H0K6 701 aaKnown RBP20.44■□□□□ 0.86
HDDC3-206ENST00000561036 CWC22Q9HCG8 908 aaKnown RBP20.44■□□□□ 0.86
HDDC3-206ENST00000561036 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
HDDC3-206ENST00000561036 WWC3Q9ULE0 1092 aa20.44■□□□□ 0.86
HDDC3-206ENST00000561036 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
HDDC3-206ENST00000561036 GPAA1O43292 621 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 ALDH1B1P30837 517 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 CUL4AQ13619 759 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 ADCK5Q3MIX3 580 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 SP8Q8IXZ3 490 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 TMX3Q96JJ7 454 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 PDRG1Q9NUG6 133 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
HDDC3-206ENST00000561036 LRRC37AA6NMS7 1700 aa20.42■□□□□ 0.86
HDDC3-206ENST00000561036 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
HDDC3-206ENST00000561036 SRGNP10124 158 aa20.42■□□□□ 0.86
HDDC3-206ENST00000561036 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
HDDC3-206ENST00000561036 MAGEB6Q8N7X4 407 aa20.42■□□□□ 0.86
HDDC3-206ENST00000561036 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
HDDC3-206ENST00000561036 CYP21A2P08686 494 aa20.41■□□□□ 0.86
HDDC3-206ENST00000561036 GPSM2P81274 684 aa20.41■□□□□ 0.86
HDDC3-206ENST00000561036 ANKRD1Q15327 319 aa20.41■□□□□ 0.86
HDDC3-206ENST00000561036 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
HDDC3-206ENST00000561036 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
HDDC3-206ENST00000561036 LIMCH1Q9UPQ0 1083 aa20.41■□□□□ 0.86
HDDC3-206ENST00000561036 PPEF1O14829 653 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-206ENST00000561036 ZMYM6O95789 1325 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 COL1A1P02452 1464 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-206ENST00000561036 RPS6KB1P23443 525 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 KLRK1P26718 216 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 ALX1Q15699 326 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 ZNF804AQ7Z570 1209 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 MASTLQ96GX5 879 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 ZSCAN31Q96LW9 406 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-206ENST00000561036 NEK1Q96PY6 1258 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
HDDC3-206ENST00000561036 MYO5AQ9Y4I1 1855 aaKnown RBP20.4■□□□□ 0.86
HDDC3-206ENST00000561036 FOXP2O15409 715 aa20.39■□□□□ 0.85
HDDC3-206ENST00000561036 FRAT2O75474 233 aaPredicted RBP20.39■□□□□ 0.85
HDDC3-206ENST00000561036 GNAT2P19087 354 aa20.39■□□□□ 0.85
HDDC3-206ENST00000561036 AK2P54819 239 aa20.39■□□□□ 0.85
HDDC3-206ENST00000561036 IMMTQ16891 758 aaKnown RBP20.39■□□□□ 0.85
HDDC3-206ENST00000561036 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
HDDC3-206ENST00000561036 AIDAQ96BJ3 306 aa20.39■□□□□ 0.85
HDDC3-206ENST00000561036 STRBPQ96SI9 672 aaKnown RBP20.39■□□□□ 0.85
HDDC3-206ENST00000561036 IQSEC3Q9UPP2 1182 aaPredicted RBP20.39■□□□□ 0.85
HDDC3-206ENST00000561036 SALL1Q9NSC2 1324 aa20.38■□□□□ 0.85
HDDC3-206ENST00000561036 FGAP02671 866 aa20.38■□□□□ 0.85
HDDC3-206ENST00000561036 SPTY2D1Q68D10 685 aaPredicted RBP20.38■□□□□ 0.85
HDDC3-206ENST00000561036 MSL1Q68DK7 614 aa20.38■□□□□ 0.85
HDDC3-206ENST00000561036 TDRD7Q8NHU6 1098 aaKnown RBP20.38■□□□□ 0.85
HDDC3-206ENST00000561036 SH2B1Q9NRF2 756 aaPredicted RBP20.38■□□□□ 0.85
HDDC3-206ENST00000561036 NSFL1CQ9UNZ2 370 aaKnown RBP20.38■□□□□ 0.85
HDDC3-206ENST00000561036 UFL1O94874 794 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 STYK1Q6J9G0 422 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 WDR66Q8TBY9 1149 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 SLC16A10Q8TF71 515 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 RAI14Q9P0K7 980 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 ABCF2Q9UG63 623 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
HDDC3-206ENST00000561036 MYH13Q9UKX3 1938 aa20.36■□□□□ 0.85
HDDC3-206ENST00000561036 PATL2C9JE40 543 aaKnown RBP20.36■□□□□ 0.85
HDDC3-206ENST00000561036 TXNRD3Q86VQ6 643 aa20.36■□□□□ 0.85
HDDC3-206ENST00000561036 DUOX1Q9NRD9 1551 aa20.36■□□□□ 0.85
HDDC3-206ENST00000561036 LTBP1Q14766 1721 aa20.36■□□□□ 0.85
HDDC3-206ENST00000561036 E7EWF7 191 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 H0YIN7 160 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 MBD4O95243 580 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 CPA1P15085 419 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 CYP7A1P22680 504 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 DEFB132Q7Z7B7 95 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 TBC1D16Q8TBP0 767 aa20.35■□□□□ 0.85
HDDC3-206ENST00000561036 TMX4Q9H1E5 349 aaPredicted RBP20.35■□□□□ 0.85
HDDC3-206ENST00000561036 NUCB2P80303 420 aa20.34■□□□□ 0.85
HDDC3-206ENST00000561036 NAA16Q6N069 864 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms