RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 H3BQF6 201 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 TOP1P11387 765 aaKnown RBP19.06■□□□□ 0.64
TPM1-228ENST00000560975 RAB11FIP4Q86YS3 637 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 GPR161Q8N6U8 529 aaKnown RBP19.06■□□□□ 0.64
TPM1-228ENST00000560975 AK7Q96M32 723 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 HSD3B7Q9H2F3 369 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 HDAC5Q9UQL6 1122 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 A0A1W2PQ27 194 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 A0A1W2PQ64 194 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 A0A1W2PQD8 194 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 SPTLC2O15270 562 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 FUT8Q9BYC5 575 aa19.06■□□□□ 0.64
TPM1-228ENST00000560975 CARMIL3Q8ND23 1372 aa19.05■□□□□ 0.64
TPM1-228ENST00000560975 ZSCAN12O43309 604 aa19.05■□□□□ 0.64
TPM1-228ENST00000560975 HOXB7P09629 217 aa19.05■□□□□ 0.64
TPM1-228ENST00000560975 PSME1Q06323 249 aa19.05■□□□□ 0.64
TPM1-228ENST00000560975 GPHNQ9NQX3 736 aaPredicted RBP19.05■□□□□ 0.64
TPM1-228ENST00000560975 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
TPM1-228ENST00000560975 MARCKSP29966 332 aaPredicted RBP19.05■□□□□ 0.64
TPM1-228ENST00000560975 PDIA3P30101 505 aaKnown RBP19.05■□□□□ 0.64
TPM1-228ENST00000560975 CWC15Q9P013 229 aaKnown RBP19.05■□□□□ 0.64
TPM1-228ENST00000560975 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
TPM1-228ENST00000560975 LINS1Q8NG48 757 aa19.04■□□□□ 0.64
TPM1-228ENST00000560975 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
TPM1-228ENST00000560975 MYH15Q9Y2K3 1946 aa19.04■□□□□ 0.64
TPM1-228ENST00000560975 PFKFB1P16118 471 aa19.04■□□□□ 0.64
TPM1-228ENST00000560975 TFCP2Q12800 502 aa19.04■□□□□ 0.64
TPM1-228ENST00000560975 DHX8Q14562 1220 aaKnown RBP19.04■□□□□ 0.64
TPM1-228ENST00000560975 KARSQ15046 597 aaKnown RBP19.03■□□□□ 0.64
TPM1-228ENST00000560975 LONRF2Q1L5Z9 754 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 CEMIPQ8WUJ3 1361 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 ATP5JP18859 108 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 MCM6Q14566 821 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 FBXO18Q8NFZ0 1043 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 KCNG4Q8TDN1 519 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 DHX58Q96C10 678 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 MPHOSPH8Q99549 860 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 DBNDD2Q9BQY9 259 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 SALL1Q9NSC2 1324 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 TOGARAM2Q6ZUX3 1019 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 GOLGA5Q8TBA6 731 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 DESI2Q9BSY9 194 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 RRP15Q9Y3B9 282 aaKnown RBP19.03■□□□□ 0.64
TPM1-228ENST00000560975 MRFAP1Q9Y605 127 aa19.03■□□□□ 0.64
TPM1-228ENST00000560975 HMGB1P09429 215 aaKnown RBP19.02■□□□□ 0.64
TPM1-228ENST00000560975 VSTM4Q8IW00 320 aa19.02■□□□□ 0.64
TPM1-228ENST00000560975 C8orf76Q96K31 380 aa19.02■□□□□ 0.64
TPM1-228ENST00000560975 VPS18Q9P253 973 aa19.02■□□□□ 0.64
TPM1-228ENST00000560975 CBFA2T2O43439 604 aa19.02■□□□□ 0.63
TPM1-228ENST00000560975 TNNI3KQ59H18 835 aa19.02■□□□□ 0.63
TPM1-228ENST00000560975 SYNE3Q6ZMZ3 975 aa19.02■□□□□ 0.63
TPM1-228ENST00000560975 RSRC2Q7L4I2 434 aaKnown RBP19.02■□□□□ 0.63
TPM1-228ENST00000560975 FANCLQ9NW38 375 aa19.02■□□□□ 0.63
TPM1-228ENST00000560975 FPGT-TNNI3KV9GXZ4 949 aa19.02■□□□□ 0.63
TPM1-228ENST00000560975 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 E7EWF7 191 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 IKBKBO14920 756 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
TPM1-228ENST00000560975 EXOSC10Q01780 885 aaKnown RBP19.01■□□□□ 0.63
TPM1-228ENST00000560975 PNOCQ13519 176 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 ZNF530Q6P9A1 599 aaPredicted RBP19.01■□□□□ 0.63
TPM1-228ENST00000560975 SRLQ86TD4 932 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 MROH7-TTC4A0A0A0MT08 1334 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 ARHGAP6O43182 974 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 ADKP55263 362 aaKnown RBP19.01■□□□□ 0.63
TPM1-228ENST00000560975 MYL5Q02045 173 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 RIC3Q7Z5B4 369 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 GOLGA1Q92805 767 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 EXOC4Q96A65 974 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 IRX2Q9BZI1 471 aaPredicted RBP19.01■□□□□ 0.63
TPM1-228ENST00000560975 PDE11AQ9HCR9 933 aa19.01■□□□□ 0.63
TPM1-228ENST00000560975 MYSM1Q5VVJ2 828 aa19■□□□□ 0.63
TPM1-228ENST00000560975 TMEM139Q8IV31 216 aa19■□□□□ 0.63
TPM1-228ENST00000560975 BAG1Q99933 345 aaPredicted RBP19■□□□□ 0.63
TPM1-228ENST00000560975 WDHD1O75717 1129 aaPredicted RBP19■□□□□ 0.63
TPM1-228ENST00000560975 IGKV5-2P06315 115 aa19■□□□□ 0.63
TPM1-228ENST00000560975 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
TPM1-228ENST00000560975 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
TPM1-228ENST00000560975 ABTB2Q8N961 1025 aa19■□□□□ 0.63
TPM1-228ENST00000560975 CCDC12Q8WUD4 166 aaPredicted RBP19■□□□□ 0.63
TPM1-228ENST00000560975 RABGGTAQ92696 567 aa19■□□□□ 0.63
TPM1-228ENST00000560975 NBPF4Q96M43 638 aa19■□□□□ 0.63
TPM1-228ENST00000560975 AGLP35573 1532 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 KIF28PB7ZC32 967 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 PUF60Q9UHX1 559 aaKnown RBP18.99■□□□□ 0.63
TPM1-228ENST00000560975 SETD1BQ9UPS6 1966 aaKnown RBP18.99■□□□□ 0.63
TPM1-228ENST00000560975 ABCC6O95255 1503 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
TPM1-228ENST00000560975 ACTN2P35609 894 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 SYKP43405 635 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 TTLL5Q6EMB2 1281 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 FOXR1Q6PIV2 292 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 GOLIM4O00461 696 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 YEATS4O95619 227 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 AXDND1Q5T1B0 1012 aaPredicted RBP18.99■□□□□ 0.63
TPM1-228ENST00000560975 LEKR1Q6ZMV7 388 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 ATG3Q9NT62 314 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 POLR3EQ9NVU0 708 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms