RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 HTRA3P83110 453 aa18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 KIF4BQ2VIQ3 1234 aa18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 CAVIN4Q5BKX8 364 aa18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 RBM26Q5T8P6 1007 aaKnown RBP18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 MYOZ2Q9NPC6 264 aa18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 IQSEC3Q9UPP2 1182 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
SNRPA1-213ENST00000560856 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
SNRPA1-213ENST00000560856 ASTN2O75129 1339 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-213ENST00000560856 ADORA1P30542 326 aa18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 MMP14P50281 582 aa18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 TIMM10P62072 90 aa18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 G3BP1Q13283 466 aaKnown RBP eCLIP18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 SIRT2Q8IXJ6 389 aa18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 DNAJC5GQ8N7S2 189 aa18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 ZBED3Q96IU2 234 aaPredicted RBP18.93■□□□□ 0.62
SNRPA1-213ENST00000560856 TRAF5O00463 557 aa18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 ZBTB22O15209 634 aa18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 SCARF1Q14162 830 aa18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 GRIK5Q16478 980 aa18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 VPS37DQ86XT2 251 aa18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 GLIS2Q9BZE0 524 aaPredicted RBP18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 POLR2AP24928 1970 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-213ENST00000560856 A0A1B0GUL7 405 aa18.91■□□□□ 0.62
SNRPA1-213ENST00000560856 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-213ENST00000560856 PHKA1P46020 1223 aa18.91■□□□□ 0.62
SNRPA1-213ENST00000560856 MFSD14BQ5SR56 506 aa18.91■□□□□ 0.62
SNRPA1-213ENST00000560856 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
SNRPA1-213ENST00000560856 WNT10BO00744 389 aa18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 NBPF9Q3BBW0 867 aa18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 DLK2Q6UY11 383 aa18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 CDC37L1Q7L3B6 337 aa18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 RPAP2Q8IXW5 612 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 AKAP2Q9Y2D5 859 aa18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-213ENST00000560856 CHAF1AQ13111 956 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 CST9Q5W186 159 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 CCDC102BQ68D86 513 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 USP48Q86UV5 1035 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 XAGE2Q96GT9 111 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 CHMP4BQ9H444 224 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 GPR108Q9NPR9 543 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 CREBZFQ9NS37 354 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 GGA3Q9NZ52 723 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 HDAC9Q9UKV0 1011 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 PCDHAC2Q9Y5I4 1007 aa18.89■□□□□ 0.61
SNRPA1-213ENST00000560856 F8W031 263 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-213ENST00000560856 ARAP2Q8WZ64 1704 aa18.88■□□□□ 0.61
SNRPA1-213ENST00000560856 TMEM88BA6NKF7 163 aa18.87■□□□□ 0.61
SNRPA1-213ENST00000560856 FRAT2O75474 233 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-213ENST00000560856 ANGEL2Q5VTE6 544 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-213ENST00000560856 KRT26Q7Z3Y9 468 aa18.87■□□□□ 0.61
SNRPA1-213ENST00000560856 TBC1D22AQ8WUA7 517 aa18.87■□□□□ 0.61
SNRPA1-213ENST00000560856 DCPSQ96C86 337 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-213ENST00000560856 AOX1Q06278 1338 aa18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 PITPNM2Q9BZ72 1349 aa18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 ADM5C9JUS6 153 aa18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 TNNI3KQ59H18 835 aa18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 NEUROD6Q96NK8 337 aa18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 FPGT-TNNI3KV9GXZ4 949 aa18.86■□□□□ 0.61
SNRPA1-213ENST00000560856 SPDYE2BA6NHP3 402 aa18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 SEMA3EO15041 775 aa18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 SPDYE6P0CI01 402 aa18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 OS9Q13438 667 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 CFAP100Q494V2 611 aa18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 WDR66Q8TBY9 1149 aa18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 PRMT6Q96LA8 375 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 GNL3LQ9NVN8 582 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
SNRPA1-213ENST00000560856 RASGRF1Q13972 1273 aa18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 DLGAP5Q15398 846 aa18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 SERPINA10Q9UK55 444 aa18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 DENND2AQ9ULE3 1009 aa18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 SCAF8Q9UPN6 1271 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 SUGT1Q9Y2Z0 365 aa18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 TRPM7Q96QT4 1865 aa18.84■□□□□ 0.61
SNRPA1-213ENST00000560856 HDLBPQ00341 1268 aaKnown RBP18.83■□□□□ 0.6
SNRPA1-213ENST00000560856 SULF1Q8IWU6 871 aa18.83■□□□□ 0.6
SNRPA1-213ENST00000560856 EAF2Q96CJ1 260 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-213ENST00000560856 KLRG1Q96E93 195 aa18.83■□□□□ 0.6
SNRPA1-213ENST00000560856 DBNDD2Q9BQY9 259 aa18.83■□□□□ 0.6
SNRPA1-213ENST00000560856 MRIQ9BWK5 157 aa18.83■□□□□ 0.6
SNRPA1-213ENST00000560856 PDS5AQ29RF7 1337 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-213ENST00000560856 SALL1Q9NSC2 1324 aa18.82■□□□□ 0.6
SNRPA1-213ENST00000560856 HMMRO75330 724 aa18.82■□□□□ 0.6
SNRPA1-213ENST00000560856 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-213ENST00000560856 ARID4AP29374 1257 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-213ENST00000560856 CRKP46108 304 aa18.82■□□□□ 0.6
SNRPA1-213ENST00000560856 HSP90AB4PQ58FF6 505 aa18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 ERC1Q8IUD2 1116 aa18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 RHPN1Q8TCX5 695 aa18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 CDCA5Q96FF9 252 aa18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 CRBNQ96SW2 442 aa18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 HMG20BQ9P0W2 317 aa18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-213ENST00000560856 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms