RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ENOX1Q8TC92 643 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 KBTBD4Q9NVX7 518 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 CEP152O94986 1710 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 EIF3AQ14152 1382 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 ZMYM3Q14202 1370 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 KIDINS220Q9ULH0 1771 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 HMGN5P82970 282 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 DIP2BQ9P265 1576 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 NR1I2O75469 434 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 FAM13AO94988 1023 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 HSP90AB1P08238 724 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 NGDNQ8NEJ9 315 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 TNPO1Q92973 898 aaKnown RBP8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 CARD11Q9BXL7 1154 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 A2MP01023 1474 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 ZNF518AQ6AHZ1 1483 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 TRPM2O94759 1503 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 ZMYM4Q5VZL5 1548 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 CCDC66A2RUB6 948 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 LONRF1Q17RB8 773 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 SENP7Q9BQF6 1050 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 LZTS1Q9Y250 596 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 NINLQ9Y2I6 1382 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 PRDM15P57071 1507 aaPredicted RBP8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 KLF4O43474 513 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 SIM2Q14190 667 aaPredicted RBP8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 IL31Q6EBC2 164 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 BMP2KQ9NSY1 1161 aaPredicted RBP8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 DOLKQ9UPQ8 538 aa8.03□□□□□ -1.12
TSPAN3-209ENST00000560715 PTPRTO14522 1441 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 KANK1Q14678 1352 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 CLGNO14967 610 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 GABPB1Q06547 395 aaPredicted RBP8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 TIGD1Q96MW7 591 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 CCDC8Q9H0W5 538 aaPredicted RBP8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 YY1AP1Q9H869 796 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 NEURL4Q96JN8 1562 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 BLMP54132 1417 aaPredicted RBP8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 CD109Q6YHK3 1445 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 GPRASP1Q5JY77 1395 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 TULP2O00295 520 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 SLC26A4O43511 780 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 ZNF445P59923 1031 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 MYO1HQ8N1T3 1032 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 FEZ1Q99689 392 aa8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 MRPS23Q9Y3D9 190 aaKnown RBP8.02□□□□□ -1.13
TSPAN3-209ENST00000560715 IGHDP01880 384 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 NEK3P51956 506 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 MCL1Q07820 350 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 RAB3GAP1Q15042 981 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 NLRP13Q86W25 1043 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 SUGP1Q8IWZ8 645 aaKnown RBP8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 PDCL2Q8N4E4 241 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 TRIM56Q9BRZ2 755 aaKnown RBP8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 MROH1Q8NDA8 1641 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 FGAP02671 866 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 PTMAP06454 111 aaKnown RBP8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 KLHL40Q2TBA0 621 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 FAM169BQ8N8A8 192 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 JARID2Q92833 1246 aaPredicted RBP8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 OSBPL7Q9BZF2 842 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 TSPYL1Q9H0U9 437 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 HDAC9Q9UKV0 1011 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 HDAC5Q9UQL6 1122 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 KIF3AQ9Y496 699 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 RNF17Q9BXT8 1623 aaKnown RBP8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 RPGRIP1LQ68CZ1 1315 aa8.01□□□□□ -1.13
TSPAN3-209ENST00000560715 MINDY4BA8MYZ0 360 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 LARP7Q4G0J3 582 aaKnown RBP eCLIP8□□□□□ -1.13
TSPAN3-209ENST00000560715 CC2D1AQ6P1N0 951 aaPredicted RBP8□□□□□ -1.13
TSPAN3-209ENST00000560715 HSCBQ8IWL3 235 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 CARD14Q9BXL6 1004 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 GINM1Q9NU53 330 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 GEMIN8Q9NWZ8 242 aaKnown RBP8□□□□□ -1.13
TSPAN3-209ENST00000560715 PCDHGA11Q9Y5H2 935 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 G3V3G9 751 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 DHX16O60231 1041 aaKnown RBP8□□□□□ -1.13
TSPAN3-209ENST00000560715 ASMTLO95671 621 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 MYL1P05976 194 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 VIL1P09327 827 aaKnown RBP8□□□□□ -1.13
TSPAN3-209ENST00000560715 KIAA2012Q0VF49 1180 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 CCSAPQ6IQ19 270 aaPredicted RBP8□□□□□ -1.13
TSPAN3-209ENST00000560715 TRIM50Q86XT4 487 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 CXorf38Q8TB03 319 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
TSPAN3-209ENST00000560715 POLIQ9UNA4 740 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 NEO1Q92859 1461 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 CLTCL1P53675 1640 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 RGL3Q3MIN7 710 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 ZKSCAN2Q63HK3 967 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 ARMCX6Q7L4S7 300 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 TTC8Q8TAM2 541 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms