RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
TRPM1-211ENST00000560658 M0R2C6 588 aa20.65■□□□□ 0.9
TRPM1-211ENST00000560658 A1BGP04217 495 aa20.65■□□□□ 0.9
TRPM1-211ENST00000560658 ME1P48163 572 aa20.65■□□□□ 0.9
TRPM1-211ENST00000560658 RALYLQ86SE5 291 aaKnown RBP20.65■□□□□ 0.9
TRPM1-211ENST00000560658 FSIP1Q8NA03 581 aa20.65■□□□□ 0.9
TRPM1-211ENST00000560658 ZBTB38Q8NAP3 1195 aaPredicted RBP20.65■□□□□ 0.9
TRPM1-211ENST00000560658 XAGE2Q96GT9 111 aa20.65■□□□□ 0.9
TRPM1-211ENST00000560658 CCDC94Q9BW85 323 aaPredicted RBP20.65■□□□□ 0.9
TRPM1-211ENST00000560658 ATRNO75882 1429 aa20.65■□□□□ 0.9
TRPM1-211ENST00000560658 SMTNL1A8MU46 457 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 TOM1O60784 492 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 DTNBO60941 627 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 GSDMDP57764 484 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 IFIT5Q13325 482 aaKnown RBP20.64■□□□□ 0.9
TRPM1-211ENST00000560658 TAF7LQ5H9L4 462 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 MPNDQ8N594 471 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 OSBP2Q969R2 916 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 C8orf76Q96K31 380 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 KCND1Q9NSA2 647 aa20.64■□□□□ 0.9
TRPM1-211ENST00000560658 CTIFO43310 598 aaKnown RBP20.64■□□□□ 0.89
TRPM1-211ENST00000560658 CDKL5O76039 1030 aa20.64■□□□□ 0.89
TRPM1-211ENST00000560658 TPM4P67936 248 aa20.64■□□□□ 0.89
TRPM1-211ENST00000560658 RBM6P78332 1123 aaKnown RBP20.64■□□□□ 0.89
TRPM1-211ENST00000560658 CCT2P78371 535 aaKnown RBP20.64■□□□□ 0.89
TRPM1-211ENST00000560658 MB21D2Q8IYB1 491 aaPredicted RBP20.64■□□□□ 0.89
TRPM1-211ENST00000560658 IMPACTQ9P2X3 320 aa20.64■□□□□ 0.89
TRPM1-211ENST00000560658 ZRSR1Q15695 479 aaKnown RBP20.63■□□□□ 0.89
TRPM1-211ENST00000560658 FBXO18Q8NFZ0 1043 aa20.63■□□□□ 0.89
TRPM1-211ENST00000560658 STRCP1A6NGW2 1772 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 KIF2AO00139 706 aaPredicted RBP20.62■□□□□ 0.89
TRPM1-211ENST00000560658 ZNF213O14771 459 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 PRC1O43663 620 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 STARD3NLO95772 234 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 CHGBP05060 677 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRPM1-211ENST00000560658 TRDNQ13061 729 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 SF3A1Q15459 793 aaKnown RBP20.62■□□□□ 0.89
TRPM1-211ENST00000560658 WASHC4Q2M389 1173 aa20.62■□□□□ 0.89
TRPM1-211ENST00000560658 CPLX2Q6PUV4 134 aaKnown RBP20.62■□□□□ 0.89
TRPM1-211ENST00000560658 FMR1NBQ8N0W7 255 aaPredicted RBP20.62■□□□□ 0.89
TRPM1-211ENST00000560658 CPLX1O14810 134 aa20.61■□□□□ 0.89
TRPM1-211ENST00000560658 STK38Q15208 465 aa20.61■□□□□ 0.89
TRPM1-211ENST00000560658 C17orf53Q8N3J3 647 aaPredicted RBP20.61■□□□□ 0.89
TRPM1-211ENST00000560658 LINC00301Q8NCQ3 95 aa20.61■□□□□ 0.89
TRPM1-211ENST00000560658 DDX17Q92841 729 aaKnown RBP20.61■□□□□ 0.89
TRPM1-211ENST00000560658 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
TRPM1-211ENST00000560658 GOLPH3LQ9H4A5 285 aa20.61■□□□□ 0.89
TRPM1-211ENST00000560658 NAP1L2Q9ULW6 460 aaPredicted RBP20.61■□□□□ 0.89
TRPM1-211ENST00000560658 SOS2Q07890 1332 aaPredicted RBP20.61■□□□□ 0.89
TRPM1-211ENST00000560658 ZMYM6O95789 1325 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 FGAP02671 866 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 FDPSP14324 419 aaKnown RBP20.6■□□□□ 0.89
TRPM1-211ENST00000560658 TIGD1Q96MW7 591 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 PUS3Q9BZE2 481 aaKnown RBP20.6■□□□□ 0.89
TRPM1-211ENST00000560658 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 PCDHA7Q9UN72 937 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 RIOK3O14730 519 aaKnown RBP20.6■□□□□ 0.89
TRPM1-211ENST00000560658 TUBB4AP04350 444 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 HSPA1LP34931 641 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 CEBPZQ03701 1054 aaKnown RBP20.6■□□□□ 0.89
TRPM1-211ENST00000560658 UBE3CQ15386 1083 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 ATP2B3Q16720 1220 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 SYNE3Q6ZMZ3 975 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 JMYQ8N9B5 988 aa20.6■□□□□ 0.89
TRPM1-211ENST00000560658 NCOA5Q9HCD5 579 aaKnown RBP20.6■□□□□ 0.89
TRPM1-211ENST00000560658 ORC3Q9UBD5 711 aaPredicted RBP20.6■□□□□ 0.89
TRPM1-211ENST00000560658 DDX60Q8IY21 1712 aaKnown RBP20.59■□□□□ 0.89
TRPM1-211ENST00000560658 GOLGA8BA8MQT2 603 aa20.59■□□□□ 0.89
TRPM1-211ENST00000560658 MYO1BO43795 1136 aa20.59■□□□□ 0.89
TRPM1-211ENST00000560658 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
TRPM1-211ENST00000560658 C11orf57Q6ZUT1 292 aaPredicted RBP20.59■□□□□ 0.89
TRPM1-211ENST00000560658 LRRC8AQ8IWT6 810 aa20.59■□□□□ 0.89
TRPM1-211ENST00000560658 SMAP1Q8IYB5 467 aaPredicted RBP20.59■□□□□ 0.89
TRPM1-211ENST00000560658 ANKRD7Q92527 254 aa20.59■□□□□ 0.89
TRPM1-211ENST00000560658 SDF4Q9BRK5 362 aa20.59■□□□□ 0.89
TRPM1-211ENST00000560658 CCDC9Q9Y3X0 531 aaKnown RBP20.59■□□□□ 0.89
TRPM1-211ENST00000560658 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 MAP3K15Q6ZN16 1313 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 SPTLC2O15270 562 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 NRDCO43847 1150 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 MYSM1Q5VVJ2 828 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 GIGYF2Q6Y7W6 1299 aaKnown RBP20.58■□□□□ 0.89
TRPM1-211ENST00000560658 BRINP3Q76B58 766 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 DHX40Q8IX18 779 aaKnown RBP20.58■□□□□ 0.89
TRPM1-211ENST00000560658 TMEM87BQ96K49 555 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 AK7Q96M32 723 aa20.58■□□□□ 0.89
TRPM1-211ENST00000560658 GPAA1O43292 621 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 CMA1P23946 247 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 KCNJ6P48051 423 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 CACTINQ8WUQ7 758 aaKnown RBP20.57■□□□□ 0.88
TRPM1-211ENST00000560658 BCL2L12Q9HB09 334 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 KIAA1468Q9P260 1216 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 RIPOR2Q9Y4F9 1068 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 RIC1Q4ADV7 1423 aa20.57■□□□□ 0.88
TRPM1-211ENST00000560658 ANKRD18BA2A2Z9 1011 aa20.56■□□□□ 0.88
TRPM1-211ENST00000560658 FOXP2O15409 715 aa20.56■□□□□ 0.88
TRPM1-211ENST00000560658 TNNT1P13805 278 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms