RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 LAMB1P07942 1786 aa10.38□□□□□ -0.75
TRAF3-209ENST00000560463 UFL1O94874 794 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 MCCP23508 829 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 UBE3CQ15386 1083 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 MCMDC2Q4G0Z9 681 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 PRPF40BQ6NWY9 871 aaKnown RBP10.37□□□□□ -0.75
TRAF3-209ENST00000560463 MPNDQ8N594 471 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 EYA3Q99504 573 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 ANTXR1Q9H6X2 564 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 ANO2Q9NQ90 1003 aa10.37□□□□□ -0.75
TRAF3-209ENST00000560463 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-209ENST00000560463 NAV1Q8NEY1 1877 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 A0A0D9SFI3 127 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 WTIPA6NIX2 430 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-209ENST00000560463 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-209ENST00000560463 IL1R1P14778 569 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 CHRNA5P30532 468 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 ANAPC15P60006 121 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 DPP8Q6V1X1 898 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-209ENST00000560463 ZGPATQ8N5A5 531 aaKnown RBP10.36□□□□□ -0.75
TRAF3-209ENST00000560463 TTLL6Q8N841 843 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 TDRD7Q8NHU6 1098 aaKnown RBP10.36□□□□□ -0.75
TRAF3-209ENST00000560463 DDRGK1Q96HY6 314 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 SGIP1Q9BQI5 828 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 POLLQ9UGP5 575 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
TRAF3-209ENST00000560463 COL1A1P02452 1464 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-209ENST00000560463 CCDC171Q6TFL3 1326 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 SALL1Q9NSC2 1324 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 SNED1Q8TER0 1413 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 KLRK1P26718 216 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 ADD2P35612 726 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 SLC9C2Q5TAH2 1124 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 SOGA3Q5TF21 947 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 SPTY2D1Q68D10 685 aaPredicted RBP10.35□□□□□ -0.75
TRAF3-209ENST00000560463 TXNRD3Q86VQ6 643 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 SUPT20HQ8NEM7 779 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 WDR66Q8TBY9 1149 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 APPBP2Q92624 585 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 RTFDC1Q9BY42 306 aaPredicted RBP10.35□□□□□ -0.75
TRAF3-209ENST00000560463 ZC3H12CQ9C0D7 883 aaKnown RBP10.35□□□□□ -0.75
TRAF3-209ENST00000560463 LSG1Q9H089 658 aaKnown RBP10.35□□□□□ -0.75
TRAF3-209ENST00000560463 IL25Q9H293 177 aa10.35□□□□□ -0.75
TRAF3-209ENST00000560463 IDH1O75874 414 aaKnown RBP10.34□□□□□ -0.75
TRAF3-209ENST00000560463 KCNA3P22001 575 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 MAP4K1Q92918 833 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 IL17RAQ96F46 866 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 COA1Q9GZY4 146 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 CD209Q9NNX6 404 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 PIH1D3Q9NQM4 214 aaKnown RBP10.34□□□□□ -0.75
TRAF3-209ENST00000560463 PIM2Q9P1W9 311 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 LRP2BPQ9P2M1 347 aa10.34□□□□□ -0.75
TRAF3-209ENST00000560463 IQSEC3Q9UPP2 1182 aaPredicted RBP10.34□□□□□ -0.75
TRAF3-209ENST00000560463 A0A0G2JLW4 131 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 TCRBV5S4A2TA0A5A2 114 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
TRAF3-209ENST00000560463 DPEP1P16444 411 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 PDE6AP16499 860 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 HSPA4P34932 840 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 PTGER2P43116 358 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 RNF20Q5VTR2 975 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 ERICH6Q7L0X2 663 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 TBC1D22AQ8WUA7 517 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 DSCC1Q9BVC3 393 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 VPS33BQ9H267 617 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 MAST3O60307 1309 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 FAM205AQ6ZU69 1335 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 ZNF532Q9HCE3 1301 aa10.33□□□□□ -0.76
TRAF3-209ENST00000560463 PTH1RQ03431 593 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 RABEP1Q15276 862 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 CCDC93Q567U6 631 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 PODNQ7Z5L7 613 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
TRAF3-209ENST00000560463 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
TRAF3-209ENST00000560463 SEC62Q99442 399 aaKnown RBP10.32□□□□□ -0.76
TRAF3-209ENST00000560463 PSMD1Q99460 953 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 SPON1Q9HCB6 807 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 RAI14Q9P0K7 980 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 WWC3Q9ULE0 1092 aa10.32□□□□□ -0.76
TRAF3-209ENST00000560463 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
TRAF3-209ENST00000560463 MYH6P13533 1939 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 RPAP1Q9BWH6 1393 aaPredicted RBP10.31□□□□□ -0.76
TRAF3-209ENST00000560463 G3V3G9 751 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
TRAF3-209ENST00000560463 ZKSCAN1P17029 563 aaPredicted RBP10.31□□□□□ -0.76
TRAF3-209ENST00000560463 GNAT2P19087 354 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
TRAF3-209ENST00000560463 BECN1Q14457 450 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms