RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 SUGT1Q9Y2Z0 365 aa17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 USP17L8P0C7I0 530 aa17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 TNNI3KQ59H18 835 aa17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 MICALL2Q8IY33 904 aa17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 SMC1BQ8NDV3 1235 aa17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 KCNQ5Q9NR82 932 aa17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.34
PKNOX1-209ENST00000560448 ZNF646O15015 1829 aaPredicted RBP17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 IGSF3O75054 1194 aa17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 EPS15P42566 896 aa17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 BCAMP50895 628 aa17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 XAGE2Q96GT9 111 aa17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
PKNOX1-209ENST00000560448 TIMM10P62072 90 aa17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 CCDC102BQ68D86 513 aa17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 CLASRPQ8N2M8 674 aaKnown RBP17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 ZGPATQ8N5A5 531 aaKnown RBP17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 ADAMTSL1Q8N6G6 1762 aa17.19■□□□□ 0.34
PKNOX1-209ENST00000560448 MYH13Q9UKX3 1938 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 GORABQ5T7V8 394 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 ZNF512BQ96KM6 892 aaPredicted RBP17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 MAST3O60307 1309 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
PKNOX1-209ENST00000560448 HDAC1Q13547 482 aaPredicted RBP17.17■□□□□ 0.34
PKNOX1-209ENST00000560448 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
PKNOX1-209ENST00000560448 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 HDLBPQ00341 1268 aaKnown RBP17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 MRIQ9BWK5 157 aa17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 PGAP2Q9UHJ9 254 aa17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
PKNOX1-209ENST00000560448 PHKA1P46020 1223 aa17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 EAPPQ56P03 285 aaPredicted RBP17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 MYOZ2Q9NPC6 264 aa17.15■□□□□ 0.34
PKNOX1-209ENST00000560448 ADORA1P30542 326 aa17.14■□□□□ 0.33
PKNOX1-209ENST00000560448 GCC1Q96CN9 775 aa17.14■□□□□ 0.33
PKNOX1-209ENST00000560448 SERPINA10Q9UK55 444 aa17.14■□□□□ 0.33
PKNOX1-209ENST00000560448 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 CERS5Q8N5B7 392 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 EAF2Q96CJ1 260 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 TMED8Q6PL24 325 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 AACSQ86V21 672 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 RWDD1Q9H446 243 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 IQSEC3Q9UPP2 1182 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 CLEC11AQ9Y240 323 aa17.13■□□□□ 0.33
PKNOX1-209ENST00000560448 MYO1BO43795 1136 aa17.12■□□□□ 0.33
PKNOX1-209ENST00000560448 SAMD7Q7Z3H4 446 aa17.12■□□□□ 0.33
PKNOX1-209ENST00000560448 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
PKNOX1-209ENST00000560448 DBNDD2Q9BQY9 259 aa17.12■□□□□ 0.33
PKNOX1-209ENST00000560448 TTF2Q9UNY4 1162 aaKnown RBP17.12■□□□□ 0.33
PKNOX1-209ENST00000560448 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
PKNOX1-209ENST00000560448 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 WNT10BO00744 389 aa17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 LDHBP07195 334 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 DCPSQ96C86 337 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
PKNOX1-209ENST00000560448 POTEIP0CG38 1075 aa17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 POTEJP0CG39 1038 aa17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 HHIPL2Q6UWX4 724 aa17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 ZBED3Q96IU2 234 aaPredicted RBP17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
PKNOX1-209ENST00000560448 JAG2Q9Y219 1238 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms