RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 IGHMBP2P38935 993 aaKnown RBP11.94□□□□□ -0.5
SMAD3-215ENST00000560424 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-215ENST00000560424 RBM5P52756 815 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMAD3-215ENST00000560424 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 CCL15Q16663 113 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-215ENST00000560424 PTPN18Q99952 460 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 TESPA1A2RU30 521 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-215ENST00000560424 F8W031 263 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-215ENST00000560424 GNRH1P01148 92 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 GJA5P36382 358 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 GTF2A2P52657 109 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 PRMT2P55345 433 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 CTSWP56202 376 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 NBPF12Q5TAG4 269 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-215ENST00000560424 SPEF2Q9C093 1822 aa11.93□□□□□ -0.5
SMAD3-215ENST00000560424 SSC5DA1L4H1 1573 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 CHL1O00533 1208 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 USP2O75604 605 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-215ENST00000560424 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
SMAD3-215ENST00000560424 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
SMAD3-215ENST00000560424 CAP1Q01518 475 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 ZBED3Q96IU2 234 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-215ENST00000560424 ANKRD2Q9GZV1 360 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 CSADQ9Y600 493 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 ECM29Q5VYK3 1845 aa11.92□□□□□ -0.5
SMAD3-215ENST00000560424 A0A1W2PPC1 479 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 HOXD10P28358 340 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 LACTBP83111 547 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-215ENST00000560424 RASA3Q14644 834 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 DUSP27Q5VZP5 1158 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 TXNRD3Q86VQ6 643 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 MTMR14Q8NCE2 650 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 RAET1EQ8TD07 263 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
SMAD3-215ENST00000560424 BIN2Q9UBW5 565 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-215ENST00000560424 ZNF646O15015 1829 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-215ENST00000560424 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-215ENST00000560424 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
SMAD3-215ENST00000560424 MS4A4AQ96JQ5 239 aa11.9□□□□□ -0.5
SMAD3-215ENST00000560424 GREM2Q9H772 168 aa11.9□□□□□ -0.5
SMAD3-215ENST00000560424 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
SMAD3-215ENST00000560424 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 TLR2O60603 784 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 UBXN2AP68543 259 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 MTFR1Q15390 333 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 FAM43AQ8N2R8 423 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 TTLL11Q8NHH1 800 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 CD209Q9NNX6 404 aa11.89□□□□□ -0.51
SMAD3-215ENST00000560424 EVI5O60447 810 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 CENPBP07199 599 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-215ENST00000560424 CETPP11597 493 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 GRK4P32298 578 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 GJA8P48165 433 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 NEXNQ0ZGT2 675 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 SHISA4Q96DD7 197 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 PRMT6Q96LA8 375 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-215ENST00000560424 TRIM47Q96LD4 638 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 METTL22Q9BUU2 404 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-215ENST00000560424 RNF208Q9H0X6 261 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 OTOFQ9HC10 1997 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 MYH3P11055 1940 aa11.88□□□□□ -0.51
SMAD3-215ENST00000560424 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-215ENST00000560424 FARP2O94887 1054 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-215ENST00000560424 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-215ENST00000560424 GJB1P08034 283 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 KLRK1P26718 216 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 TNNI2P48788 182 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 VGLL4Q14135 290 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 ZNF804AQ7Z570 1209 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-215ENST00000560424 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
SMAD3-215ENST00000560424 ZCCHC17Q9NP64 241 aaKnown RBP11.87□□□□□ -0.51
SMAD3-215ENST00000560424 CCL5P13501 91 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 PSMC4P43686 418 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 CERS5Q8N5B7 392 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 PRO3102Q9H379 93 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 MAP3K2Q9Y2U5 619 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 RIPOR2Q9Y4F9 1068 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 RANBP2P49792 3224 aaKnown RBP11.86□□□□□ -0.51
SMAD3-215ENST00000560424 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
SMAD3-215ENST00000560424 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-215ENST00000560424 SOX1O00570 391 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-215ENST00000560424 ITGA6P23229 1130 aa11.85□□□□□ -0.51
SMAD3-215ENST00000560424 CHRNDQ07001 517 aa11.85□□□□□ -0.51
SMAD3-215ENST00000560424 SNAPC2Q13487 334 aa11.85□□□□□ -0.51
SMAD3-215ENST00000560424 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms