RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
IRF9-208ENST00000560311 GMPRP36959 345 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 C1QTNF8P60827 252 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 FUT2Q10981 343 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 CCDC93Q567U6 631 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 PPP1R42Q7Z4L9 355 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 NLRP10Q86W26 655 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 FAM9BQ8IZU0 186 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 PLBD2Q8NHP8 589 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 RPGRQ92834 1020 aaKnown RBP8.39□□□□□ -1.07
IRF9-208ENST00000560311 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 HYPKQ9NX55 129 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
IRF9-208ENST00000560311 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
IRF9-208ENST00000560311 DDX60Q8IY21 1712 aaKnown RBP8.38□□□□□ -1.07
IRF9-208ENST00000560311 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
IRF9-208ENST00000560311 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
IRF9-208ENST00000560311 TSPYL6Q8N831 410 aa8.38□□□□□ -1.07
IRF9-208ENST00000560311 RDH13Q8NBN7 331 aa8.38□□□□□ -1.07
IRF9-208ENST00000560311 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
IRF9-208ENST00000560311 ABCC4O15439 1325 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 SH3TC1Q8TE82 1336 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 TWISTNBQ3B726 338 aaPredicted RBP8.37□□□□□ -1.07
IRF9-208ENST00000560311 CCDC30Q5VVM6 783 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 ZSCAN1Q8NBB4 408 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 C7orf43Q8WVR3 580 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
IRF9-208ENST00000560311 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 PHAXQ9H814 394 aaKnown RBP8.37□□□□□ -1.07
IRF9-208ENST00000560311 NMRK2Q9NPI5 230 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
IRF9-208ENST00000560311 LRRC37AA6NMS7 1700 aa8.37□□□□□ -1.07
IRF9-208ENST00000560311 ATP5J2-PTCD1G3V325 749 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 OATP04181 439 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 HCLS1P14317 486 aaPredicted RBP8.36□□□□□ -1.07
IRF9-208ENST00000560311 ALDH1B1P30837 517 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
IRF9-208ENST00000560311 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
IRF9-208ENST00000560311 TRIM32Q13049 653 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 RIC3Q7Z5B4 369 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 WDR63Q8IWG1 891 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 STK31Q9BXU1 1019 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 COL4A1P02462 1669 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 COL4A5P29400 1685 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 SBF1O95248 1867 aa8.36□□□□□ -1.07
IRF9-208ENST00000560311 DUOX1Q9NRD9 1551 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 WDR90Q96KV7 1748 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 TCERG1O14776 1098 aaKnown RBP8.35□□□□□ -1.07
IRF9-208ENST00000560311 DDX58O95786 925 aaKnown RBP8.35□□□□□ -1.07
IRF9-208ENST00000560311 FECHP22830 423 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 SLC10A5Q5PT55 438 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 RTKN2Q8IZC4 609 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 CRAMP1Q96RY5 1269 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 MYD88Q99836 296 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 CHMP4AQ9BY43 222 aa8.35□□□□□ -1.07
IRF9-208ENST00000560311 ZNF277Q9NRM2 450 aaPredicted RBP8.35□□□□□ -1.07
IRF9-208ENST00000560311 ZNF521Q96K83 1311 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 ZNF541Q9H0D2 1346 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 GLTPD2A6NH11 291 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 VEGFBP49765 207 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 EXOSC9Q06265 439 aaKnown RBP8.34□□□□□ -1.07
IRF9-208ENST00000560311 RNF19BQ6ZMZ0 732 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
IRF9-208ENST00000560311 FAM89AQ96GI7 184 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 MYH16Q9H6N6 1097 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
IRF9-208ENST00000560311 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
IRF9-208ENST00000560311 MAP3K2Q9Y2U5 619 aa8.34□□□□□ -1.07
IRF9-208ENST00000560311 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
IRF9-208ENST00000560311 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
IRF9-208ENST00000560311 FLIIQ13045 1269 aa8.33□□□□□ -1.08
IRF9-208ENST00000560311 GRAPQ13588 217 aa8.33□□□□□ -1.08
IRF9-208ENST00000560311 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
IRF9-208ENST00000560311 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
IRF9-208ENST00000560311 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
IRF9-208ENST00000560311 GRAPLQ8TC17 118 aaPredicted RBP8.33□□□□□ -1.08
IRF9-208ENST00000560311 KCNV2Q8TDN2 545 aa8.33□□□□□ -1.08
IRF9-208ENST00000560311 PSMD1Q99460 953 aa8.33□□□□□ -1.08
IRF9-208ENST00000560311 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
IRF9-208ENST00000560311 CWC25Q9NXE8 425 aaPredicted RBP8.33□□□□□ -1.08
IRF9-208ENST00000560311 LTBP1Q14766 1721 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 PI4KAP2A4QPH2 592 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 CCER2I3L3R5 266 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 IRS4O14654 1257 aaPredicted RBP8.32□□□□□ -1.08
IRF9-208ENST00000560311 TOMM70O94826 608 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
IRF9-208ENST00000560311 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
IRF9-208ENST00000560311 MSS51Q4VC12 460 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 KSR2Q6VAB6 950 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 G2E3Q7L622 706 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
IRF9-208ENST00000560311 PI4KAP1Q8N8J0 262 aa8.32□□□□□ -1.08
IRF9-208ENST00000560311 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms