RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.12
SNX1-209ENST00000559961 SLFN5Q08AF3 891 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 CFAP100Q494V2 611 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 CSRNP1Q96S65 589 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 ZIC5Q96T25 663 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.12
SNX1-209ENST00000559961 VEZTQ9HBM0 779 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 RNF186Q9NXI6 227 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 SCAF8Q9UPN6 1271 aaKnown RBP15.77■□□□□ 0.12
SNX1-209ENST00000559961 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 CACNA1FO60840 1977 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 MYH3P11055 1940 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
SNX1-209ENST00000559961 SREBF2Q12772 1141 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 TNFAIP1Q13829 316 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 PRKG1Q13976 671 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 RASAL3Q86YV0 1011 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 SLC10A4Q96EP9 437 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 DEFB129Q9H1M3 183 aa15.76■□□□□ 0.11
SNX1-209ENST00000559961 UTYO14607 1347 aa15.75■□□□□ 0.11
SNX1-209ENST00000559961 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
SNX1-209ENST00000559961 MCOLN1Q9GZU1 580 aa15.75■□□□□ 0.11
SNX1-209ENST00000559961 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.75■□□□□ 0.11
SNX1-209ENST00000559961 ANGEL1Q9UNK9 670 aaKnown RBP15.75■□□□□ 0.11
SNX1-209ENST00000559961 JAG2Q9Y219 1238 aa15.75■□□□□ 0.11
SNX1-209ENST00000559961 SCN9AQ15858 1988 aa15.75■□□□□ 0.11
SNX1-209ENST00000559961 IFIT1P09914 478 aaKnown RBP15.74■□□□□ 0.11
SNX1-209ENST00000559961 GYG1P46976 350 aa15.74■□□□□ 0.11
SNX1-209ENST00000559961 MOB2Q70IA6 237 aa15.74■□□□□ 0.11
SNX1-209ENST00000559961 TBC1D22AQ8WUA7 517 aa15.74■□□□□ 0.11
SNX1-209ENST00000559961 TTF2Q9UNY4 1162 aaKnown RBP15.74■□□□□ 0.11
SNX1-209ENST00000559961 THSD7BQ9C0I4 1608 aa15.74■□□□□ 0.11
SNX1-209ENST00000559961 CLRN2A0PK11 232 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 IREB2P48200 963 aaKnown RBP15.73■□□□□ 0.11
SNX1-209ENST00000559961 TNNI2P48788 182 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 CERS5Q8N5B7 392 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 TDRD7Q8NHU6 1098 aaKnown RBP15.73■□□□□ 0.11
SNX1-209ENST00000559961 FAM84BQ96KN1 310 aaPredicted RBP15.73■□□□□ 0.11
SNX1-209ENST00000559961 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
SNX1-209ENST00000559961 API5Q9BZZ5 524 aaKnown RBP15.73■□□□□ 0.11
SNX1-209ENST00000559961 SERPINA10Q9UK55 444 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 RIPOR2Q9Y4F9 1068 aa15.73■□□□□ 0.11
SNX1-209ENST00000559961 FAM205AQ6ZU69 1335 aa15.72■□□□□ 0.11
SNX1-209ENST00000559961 UNCXA6NJT0 531 aa15.72■□□□□ 0.11
SNX1-209ENST00000559961 PDE8BO95263 885 aa15.72■□□□□ 0.11
SNX1-209ENST00000559961 UBTFL1P0CB47 393 aaPredicted RBP15.72■□□□□ 0.11
SNX1-209ENST00000559961 INHBEP58166 350 aa15.72■□□□□ 0.11
SNX1-209ENST00000559961 MKRN3Q13064 507 aaKnown RBP15.72■□□□□ 0.11
SNX1-209ENST00000559961 CHAF1AQ13111 956 aaPredicted RBP15.72■□□□□ 0.11
SNX1-209ENST00000559961 RABL6Q3YEC7 729 aaPredicted RBP15.72■□□□□ 0.11
SNX1-209ENST00000559961 ZBED3Q96IU2 234 aaPredicted RBP15.72■□□□□ 0.11
SNX1-209ENST00000559961 TMOD2Q9NZR1 351 aa15.72■□□□□ 0.11
SNX1-209ENST00000559961 COL1A1P02452 1464 aaPredicted RBP15.71■□□□□ 0.11
SNX1-209ENST00000559961 ALDH1A1P00352 501 aa15.71■□□□□ 0.11
SNX1-209ENST00000559961 PTPN12Q05209 780 aaKnown RBP15.71■□□□□ 0.11
SNX1-209ENST00000559961 PUM3Q15397 648 aaKnown RBP15.71■□□□□ 0.11
SNX1-209ENST00000559961 OTUD7BQ6GQQ9 843 aa15.71■□□□□ 0.11
SNX1-209ENST00000559961 PRMT6Q96LA8 375 aaPredicted RBP15.71■□□□□ 0.11
SNX1-209ENST00000559961 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SNX1-209ENST00000559961 IRS2Q9Y4H2 1338 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 PAPPA2Q9BXP8 1791 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 SLC5A1P13866 664 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 TM4SF4P48230 202 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 LRRC24Q50LG9 513 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 FBXO33Q7Z6M2 555 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 KAZALD1Q96I82 304 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 GNL3LQ9NVN8 582 aaKnown RBP15.7■□□□□ 0.1
SNX1-209ENST00000559961 SPEF2Q9C093 1822 aa15.7■□□□□ 0.1
SNX1-209ENST00000559961 MAST3O60307 1309 aa15.69■□□□□ 0.1
SNX1-209ENST00000559961 MANSC4A6NHS7 340 aaPredicted RBP15.69■□□□□ 0.1
SNX1-209ENST00000559961 RASA3Q14644 834 aa15.69■□□□□ 0.1
SNX1-209ENST00000559961 CTU1Q7Z7A3 348 aaKnown RBP15.69■□□□□ 0.1
SNX1-209ENST00000559961 ANKRD44Q8N8A2 993 aa15.69■□□□□ 0.1
SNX1-209ENST00000559961 TEKT1Q969V4 418 aa15.69■□□□□ 0.1
SNX1-209ENST00000559961 HOOK2Q96ED9 719 aa15.69■□□□□ 0.1
SNX1-209ENST00000559961 NOB1Q9ULX3 412 aaKnown RBP15.69■□□□□ 0.1
SNX1-209ENST00000559961 POLR2AP24928 1970 aaKnown RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 EYA2O00167 538 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 CRKP46108 304 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 HDLBPQ00341 1268 aaKnown RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 MLLT1Q03111 559 aaPredicted RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 PKN2Q16513 984 aaKnown RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 LDLRAD1Q5T700 205 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 DZIP1LQ8IYY4 767 aaKnown RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 LPIN2Q92539 896 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 ZNF70Q9UC06 446 aaPredicted RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 IQSEC3Q9UPP2 1182 aaPredicted RBP15.68■□□□□ 0.1
SNX1-209ENST00000559961 SUGT1Q9Y2Z0 365 aa15.68■□□□□ 0.1
SNX1-209ENST00000559961 PSME4Q14997 1843 aa15.67■□□□□ 0.1
SNX1-209ENST00000559961 TBC1D8O95759 1140 aa15.67■□□□□ 0.1
SNX1-209ENST00000559961 ZBTB48P10074 688 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms