RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 YDJCA8MPS7 323 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 ATP5JP18859 108 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 PDE4AP27815 886 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 RGS3P49796 1198 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 PDE1AP54750 535 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 RASGRF1Q13972 1273 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 TNIP1Q15025 636 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 PLEKHM2Q8IWE5 1019 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 SPATA5Q8NB90 893 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
SMAD6-204ENST00000559931 MCAMP43121 646 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 CXCL9Q07325 125 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 SCARF1Q14162 830 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 ZNF526Q8TF50 670 aaPredicted RBP17.48■□□□□ 0.39
SMAD6-204ENST00000559931 DNAJC2Q99543 621 aaKnown RBP17.48■□□□□ 0.39
SMAD6-204ENST00000559931 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 GJA3Q9Y6H8 435 aa17.48■□□□□ 0.39
SMAD6-204ENST00000559931 FZD9O00144 591 aa17.47■□□□□ 0.39
SMAD6-204ENST00000559931 GLRX3O76003 335 aaKnown RBP17.47■□□□□ 0.39
SMAD6-204ENST00000559931 STRIP1Q5VSL9 837 aa17.47■□□□□ 0.39
SMAD6-204ENST00000559931 PI16Q6UXB8 463 aa17.47■□□□□ 0.39
SMAD6-204ENST00000559931 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
SMAD6-204ENST00000559931 WDR66Q8TBY9 1149 aa17.47■□□□□ 0.39
SMAD6-204ENST00000559931 COL4A5P29400 1685 aa17.47■□□□□ 0.39
SMAD6-204ENST00000559931 PSMD14O00487 310 aa17.46■□□□□ 0.39
SMAD6-204ENST00000559931 ZAP70P43403 619 aa17.46■□□□□ 0.39
SMAD6-204ENST00000559931 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
SMAD6-204ENST00000559931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMAD6-204ENST00000559931 ABCF2Q9UG63 623 aa17.46■□□□□ 0.39
SMAD6-204ENST00000559931 NDUFB9Q9Y6M9 179 aa17.46■□□□□ 0.39
SMAD6-204ENST00000559931 SCN9AQ15858 1988 aa17.46■□□□□ 0.39
SMAD6-204ENST00000559931 FAM205AQ6ZU69 1335 aa17.46■□□□□ 0.38
SMAD6-204ENST00000559931 SALL3Q9BXA9 1300 aa17.46■□□□□ 0.38
SMAD6-204ENST00000559931 GOLIM4O00461 696 aa17.45■□□□□ 0.38
SMAD6-204ENST00000559931 MAP4K4O95819 1239 aaPredicted RBP17.45■□□□□ 0.38
SMAD6-204ENST00000559931 MFSD14BQ5SR56 506 aa17.45■□□□□ 0.38
SMAD6-204ENST00000559931 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
SMAD6-204ENST00000559931 HAUS7Q99871 368 aa17.45■□□□□ 0.38
SMAD6-204ENST00000559931 MXD3Q9BW11 206 aa17.45■□□□□ 0.38
SMAD6-204ENST00000559931 TRIM6-TRIM34B2RNG4 842 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
SMAD6-204ENST00000559931 TBC1D9Q6ZT07 1266 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 ZGPATQ8N5A5 531 aaKnown RBP17.44■□□□□ 0.38
SMAD6-204ENST00000559931 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
SMAD6-204ENST00000559931 PI4K2BQ8TCG2 481 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 OSBPL3Q9H4L5 887 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 PAG1Q9NWQ8 432 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 LRP2BPQ9P2M1 347 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 AKAP11Q9UKA4 1901 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 AOX1Q06278 1338 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
SMAD6-204ENST00000559931 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
SMAD6-204ENST00000559931 TTF1Q15361 905 aaPredicted RBP17.43■□□□□ 0.38
SMAD6-204ENST00000559931 DACT2Q5SW24 774 aa17.43■□□□□ 0.38
SMAD6-204ENST00000559931 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
SMAD6-204ENST00000559931 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
SMAD6-204ENST00000559931 PDS5AQ29RF7 1337 aaKnown RBP17.43■□□□□ 0.38
SMAD6-204ENST00000559931 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
SMAD6-204ENST00000559931 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
SMAD6-204ENST00000559931 LDHBP07195 334 aaKnown RBP17.42■□□□□ 0.38
SMAD6-204ENST00000559931 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
SMAD6-204ENST00000559931 GPC2Q8N158 579 aa17.42■□□□□ 0.38
SMAD6-204ENST00000559931 RILPL2Q969X0 211 aa17.42■□□□□ 0.38
SMAD6-204ENST00000559931 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
SMAD6-204ENST00000559931 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
SMAD6-204ENST00000559931 ZBTB22O15209 634 aa17.41■□□□□ 0.38
SMAD6-204ENST00000559931 IDH1O75874 414 aaKnown RBP17.41■□□□□ 0.38
SMAD6-204ENST00000559931 DDNO94850 711 aaPredicted RBP17.41■□□□□ 0.38
SMAD6-204ENST00000559931 ANTXR1Q9H6X2 564 aa17.41■□□□□ 0.38
SMAD6-204ENST00000559931 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
SMAD6-204ENST00000559931 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
SMAD6-204ENST00000559931 PSME4Q14997 1843 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 COL1A1P02452 1464 aaPredicted RBP17.4■□□□□ 0.38
SMAD6-204ENST00000559931 FKBP1AP62942 108 aaKnown RBP17.4■□□□□ 0.38
SMAD6-204ENST00000559931 TTC22Q5TAA0 569 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 KIAA0825Q8IV33 1275 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 CERS5Q8N5B7 392 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 PIH1D3Q9NQM4 214 aaKnown RBP17.4■□□□□ 0.38
SMAD6-204ENST00000559931 TTF2Q9UNY4 1162 aaKnown RBP17.4■□□□□ 0.38
SMAD6-204ENST00000559931 SALL1Q9NSC2 1324 aa17.4■□□□□ 0.38
SMAD6-204ENST00000559931 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 RPS12P25398 132 aaKnown RBP17.39■□□□□ 0.37
SMAD6-204ENST00000559931 GMPSP49915 693 aaPredicted RBP17.39■□□□□ 0.37
SMAD6-204ENST00000559931 MAP3K12Q12852 859 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 DZIP1Q86YF9 867 aaKnown RBP17.39■□□□□ 0.37
SMAD6-204ENST00000559931 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 EVI5LQ96CN4 794 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 FSD1Q9BTV5 496 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
SMAD6-204ENST00000559931 HDAC9Q9UKV0 1011 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
SMAD6-204ENST00000559931 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
SMAD6-204ENST00000559931 USP17L8P0C7I0 530 aa17.38■□□□□ 0.37
SMAD6-204ENST00000559931 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms