RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 NIM1KQ8IY84 436 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 KIF1BPQ96EK5 621 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 CCDC8Q9H0W5 538 aaPredicted RBP11.16□□□□□ -0.62
HMG20A-209ENST00000559728 SBF1O95248 1867 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 RAD17O75943 681 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 DDNO94850 711 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-209ENST00000559728 SLC5A1P13866 664 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 SCARF1Q14162 830 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 DACT2Q5SW24 774 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 CCDC102BQ68D86 513 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 CERS5Q8N5B7 392 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
HMG20A-209ENST00000559728 JDP2Q8WYK2 163 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 GMLQ99445 158 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 MXD3Q9BW11 206 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-209ENST00000559728 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
HMG20A-209ENST00000559728 FAM205AQ6ZU69 1335 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 SALL3Q9BXA9 1300 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 PSMD14O00487 310 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 VIL1P09327 827 aaKnown RBP11.14□□□□□ -0.63
HMG20A-209ENST00000559728 GRIK5Q16478 980 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 C16orf71Q8IYS4 520 aaPredicted RBP11.14□□□□□ -0.63
HMG20A-209ENST00000559728 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
HMG20A-209ENST00000559728 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 LRRCC1Q9C099 1032 aa11.14□□□□□ -0.63
HMG20A-209ENST00000559728 IQSEC3Q9UPP2 1182 aaPredicted RBP11.14□□□□□ -0.63
HMG20A-209ENST00000559728 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 ARID4AP29374 1257 aaPredicted RBP11.13□□□□□ -0.63
HMG20A-209ENST00000559728 SCNN1DP51172 638 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 GTF2IP78347 998 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 STRIP1Q5VSL9 837 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 CIAPIN1Q6FI81 312 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 PI16Q6UXB8 463 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 ZNF804AQ7Z570 1209 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 AACSQ86V21 672 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
HMG20A-209ENST00000559728 NEUROD6Q96NK8 337 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 JAG2Q9Y219 1238 aa11.13□□□□□ -0.63
HMG20A-209ENST00000559728 SCN9AQ15858 1988 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 MAP3K13O43283 966 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 NUCB1Q02818 461 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 CAVIN4Q5BKX8 364 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-209ENST00000559728 GPC2Q8N158 579 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 CLASRPQ8N2M8 674 aaKnown RBP11.12□□□□□ -0.63
HMG20A-209ENST00000559728 ZNF512BQ96KM6 892 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-209ENST00000559728 HMG20BQ9P0W2 317 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 ARAP2Q8WZ64 1704 aa11.12□□□□□ -0.63
HMG20A-209ENST00000559728 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-209ENST00000559728 MCAMP43121 646 aa11.11□□□□□ -0.63
HMG20A-209ENST00000559728 GMPSP49915 693 aaPredicted RBP11.11□□□□□ -0.63
HMG20A-209ENST00000559728 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
HMG20A-209ENST00000559728 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
HMG20A-209ENST00000559728 TTLL5Q6EMB2 1281 aa11.11□□□□□ -0.63
HMG20A-209ENST00000559728 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
HMG20A-209ENST00000559728 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
HMG20A-209ENST00000559728 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
HMG20A-209ENST00000559728 DICER1Q9UPY3 1922 aaKnown RBP11.1□□□□□ -0.63
HMG20A-209ENST00000559728 SEMA3EO15041 775 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 EGFRP00533 1210 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 YY1P25490 414 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 PDE4AP27815 886 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 EPS15P42566 896 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 FKBP1AP62942 108 aaKnown RBP11.1□□□□□ -0.63
HMG20A-209ENST00000559728 TNIP1Q15025 636 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 ERICH6BQ5W0A0 696 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 GJA3Q9Y6H8 435 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
HMG20A-209ENST00000559728 CHD4Q14839 1912 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 G3V3G9 751 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 CYP2E1P05181 493 aaPredicted RBP11.09□□□□□ -0.63
HMG20A-209ENST00000559728 CHAF1AQ13111 956 aaPredicted RBP11.09□□□□□ -0.63
HMG20A-209ENST00000559728 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 B4GALNT3Q6L9W6 998 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 CHD1LQ86WJ1 897 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 VPS37DQ86XT2 251 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
HMG20A-209ENST00000559728 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 ZNF384Q8TF68 577 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 DPF2Q92785 391 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
HMG20A-209ENST00000559728 KIF3CO14782 793 aa11.08□□□□□ -0.64
HMG20A-209ENST00000559728 NEFLP07196 543 aa11.08□□□□□ -0.64
HMG20A-209ENST00000559728 IFIT2P09913 472 aaKnown RBP11.08□□□□□ -0.64
HMG20A-209ENST00000559728 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
HMG20A-209ENST00000559728 ATP5JP18859 108 aa11.08□□□□□ -0.64
HMG20A-209ENST00000559728 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms